Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:84135706-85205963

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obsty4 18 39486861 to 84620653 45133792 QTL obesity 4
Cpgi10339 18 84162455 to 84163174 719 CpG island CpG island 10339
Zfp407 18 84207701 to 84589539 381838 - protein coding gene zinc finger protein 407
Tssr154128 18 84243258 to 84243262 4 - TSS region transcription start site region 154128
Tssr5394 18 84251528 to 84251530 2 + TSS region transcription start site region 5394
D18Mit115 18 84260946 to 84261117 171 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 115
A130068F13Rik 18 84262945 to 84266500 3555 unclassified gene RIKEN cDNA A130068F13 gene
Tssr152208 18 84293188 to 84293205 17 + TSS region transcription start site region 152208
Tssr152209 18 84293219 to 84293236 17 + TSS region transcription start site region 152209
Tssr154129 18 84301280 to 84301314 34 - TSS region transcription start site region 154129
Tssr154130 18 84339533 to 84339552 19 - TSS region transcription start site region 154130
Gm37216 18 84372669 to 84376146 3477 - unclassified gene predicted gene, 37216
Tssr152210 18 84386124 to 84386125 1 + TSS region transcription start site region 152210
Tssr154131 18 84412389 to 84412398 9 - TSS region transcription start site region 154131
Tssr154132 18 84468645 to 84468648 3 - TSS region transcription start site region 154132
Gm31909 18 84476865 to 84485826 8961 - lncRNA gene predicted gene, 31909
Tssr154133 18 84518642 to 84518654 12 - TSS region transcription start site region 154133
Cpgi10340 18 84588564 to 84590174 1610 CpG island CpG island 10340
Tssr154134 18 84589460 to 84589486 26 - TSS region transcription start site region 154134
Tssr154135 18 84589491 to 84589527 36 - TSS region transcription start site region 154135
Tssr152211 18 84589781 to 84589808 27 + TSS region transcription start site region 152211
Tssr154136 18 84589916 to 84589943 27 - TSS region transcription start site region 154136
Cndp1 18 84610509 to 84650084 39575 - protein coding gene carnosine dipeptidase 1 (metallopeptidase M20 family)
D18Mit213 18 84620529 to 84620653 124 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 213
D18Mit214.2 18 84620744 to 84620884 140 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 214.2
D18Mit214 18 84620901 to 84621022 121 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 214
Tssr154137 18 84649924 to 84649953 29 - TSS region transcription start site region 154137
Gm7289 18 84658932 to 84659844 912 - pseudogene predicted gene 7289
Tssr154138 18 84659936 to 84659943 7 - TSS region transcription start site region 154138
Tssr154139 18 84664849 to 84664896 47 - TSS region transcription start site region 154139
Cndp2 18 84667470 to 84685633 18163 - protein coding gene CNDP dipeptidase 2 (metallopeptidase M20 family)
Cpgi10341 18 84669755 to 84669923 168 CpG island CpG island 10341
Tssr154140 18 84669875 to 84669887 12 - TSS region transcription start site region 154140
Cpgi10342 18 84670706 to 84670963 257 CpG island CpG island 10342
Tssr154141 18 84675297 to 84675317 20 - TSS region transcription start site region 154141
Tssr154142 18 84676674 to 84676679 5 - TSS region transcription start site region 154142
Tssr154143 18 84679097 to 84679106 9 - TSS region transcription start site region 154143
Tssr154144 18 84680587 to 84680591 4 - TSS region transcription start site region 154144
Tssr154145 18 84681966 to 84682032 66 - TSS region transcription start site region 154145
Tssr154146 18 84682045 to 84682056 11 - TSS region transcription start site region 154146
2900046H12Rik 18 84683156 to 84683723 567 unclassified gene RIKEN cDNA 2900046H12 gene
Cpgi10343 18 84684913 to 84686007 1094 CpG island CpG island 10343
Tssr154147 18 84685615 to 84685671 56 - TSS region transcription start site region 154147
Gm2390 18 84712531 to 84713664 1133 + pseudogene predicted gene 2390
Tssr152212 18 84712532 to 84712543 11 + TSS region transcription start site region 152212
D030046N08Rik 18 84719004 to 84720775 1771 - unclassified non-coding RNA gene RIKEN cDNA D030046N08 gene
Tssr152213 18 84719486 to 84719507 21 + TSS region transcription start site region 152213
Cpgi10344 18 84719683 to 84720967 1284 CpG island CpG island 10344
Dipk1c 18 84720019 to 84740436 20417 + protein coding gene divergent protein kinase domain 1C
Tssr152214 18 84720143 to 84720171 28 + TSS region transcription start site region 152214
Tssr154148 18 84720705 to 84720718 13 - TSS region transcription start site region 154148
Tssr154149 18 84720773 to 84720783 10 - TSS region transcription start site region 154149
Tssr152215 18 84720871 to 84720889 18 + TSS region transcription start site region 152215
Tssr152216 18 84721141 to 84721146 5 + TSS region transcription start site region 152216
Cpgi10345 18 84729205 to 84729563 358 CpG island CpG island 10345
Cpgi10346 18 84729974 to 84730399 425 CpG island CpG island 10346
Gm22014 18 84737102 to 84737391 289 - unclassified non-coding RNA gene predicted gene, 22014
Gm25005 18 84742162 to 84742317 155 - snRNA gene predicted gene, 25005
Gm17266 18 84798558 to 84838898 40340 - protein coding gene predicted gene, 17266
Gm22819 18 84822002 to 84822304 302 + unclassified non-coding RNA gene predicted gene, 22819
Cpgi10347 18 84838424 to 84838748 324 CpG island CpG island 10347
Tssr152217 18 84838664 to 84838688 24 + TSS region transcription start site region 152217
Tssr152218 18 84848943 to 84848950 7 + TSS region transcription start site region 152218
Cpgi10348 18 84851290 to 84851845 555 CpG island CpG island 10348
Tssr152219 18 84851331 to 84851348 17 + TSS region transcription start site region 152219
Cyb5a 18 84851342 to 84879863 28521 + protein coding gene cytochrome b5 type A (microsomal)
Tssr152220 18 84851352 to 84851376 24 + TSS region transcription start site region 152220
Tssr152221 18 84851378 to 84851400 22 + TSS region transcription start site region 152221
Tssr152222 18 84851407 to 84851429 22 + TSS region transcription start site region 152222
Tssr152223 18 84851758 to 84851807 49 + TSS region transcription start site region 152223
Gm16146 18 84858636 to 84859547 911 - antisense lncRNA gene predicted gene 16146
Tssr152224 18 84859423 to 84859434 11 + TSS region transcription start site region 152224
Tssr152225 18 84871563 to 84871576 13 + TSS region transcription start site region 152225
Tssr152226 18 84871929 to 84871934 5 + TSS region transcription start site region 152226
Tssr152227 18 84877814 to 84877833 19 + TSS region transcription start site region 152227
Tssr152228 18 84879590 to 84879606 16 + TSS region transcription start site region 152228
Tssr152229 18 84932882 to 84932886 4 + TSS region transcription start site region 152229
Tssr152230 18 84934542 to 84934556 14 + TSS region transcription start site region 152230
Tssr152231 18 84934594 to 84934617 23 + TSS region transcription start site region 152231
Tssr152232 18 84934625 to 84934634 9 + TSS region transcription start site region 152232
Tssr152233 18 84934646 to 84934651 5 + TSS region transcription start site region 152233
Tssr152234 18 84934653 to 84934665 12 + TSS region transcription start site region 152234
Fbxo15 18 84934782 to 84981472 46690 + protein coding gene F-box protein 15
Tssr152235 18 84935015 to 84935031 16 + TSS region transcription start site region 152235
Tssr152236 18 84936206 to 84936210 4 + TSS region transcription start site region 152236
Timm21 18 84947294 to 84951524 4230 - protein coding gene translocase of inner mitochondrial membrane 21
Tssr154150 18 84951428 to 84951442 14 - TSS region transcription start site region 154150
Tssr154151 18 84951451 to 84951462 11 - TSS region transcription start site region 154151
Cpgi10349 18 84951470 to 84952366 896 CpG island CpG island 10349
Tssr154152 18 84951477 to 84951536 59 - TSS region transcription start site region 154152
Tssr152237 18 84952085 to 84952128 43 + TSS region transcription start site region 152237
D18Dcr11 18 85013395 to 85013490 95 DNA segment DNA Segment, Chr 18, Derry C. Roopenian 11
Tssr152238 18 85071746 to 85071765 19 + TSS region transcription start site region 152238
Tssr152239 18 85071767 to 85071774 7 + TSS region transcription start site region 152239
Tssr152240 18 85071833 to 85071859 26 + TSS region transcription start site region 152240