Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:84107701-84689539

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obsty4 18 39486861 to 84620653 45133792 QTL obesity 4
Pas7 18 72612523 to 84126470 11513947 QTL pulmonary adenoma susceptibility 7
Idd21.1 18 74429267 to 84126470 9697203 QTL insulin dependent diabetes susceptibility 21.1
Hdlq31 18 84126264 to 84126470 206 QTL HDL QTL 31
D18Mit4 18 84126264 to 84126470 206 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 4
Cpgi10339 18 84162455 to 84163174 719 CpG island CpG island 10339
Zfp407 18 84207701 to 84589539 381838 - protein coding gene zinc finger protein 407
Tssr154128 18 84243258 to 84243262 4 - TSS region transcription start site region 154128
Tssr5394 18 84251528 to 84251530 2 + TSS region transcription start site region 5394
D18Mit115 18 84260946 to 84261117 171 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 115
A130068F13Rik 18 84262945 to 84266500 3555 unclassified gene RIKEN cDNA A130068F13 gene
Tssr152208 18 84293188 to 84293205 17 + TSS region transcription start site region 152208
Tssr152209 18 84293219 to 84293236 17 + TSS region transcription start site region 152209
Tssr154129 18 84301280 to 84301314 34 - TSS region transcription start site region 154129
Tssr154130 18 84339533 to 84339552 19 - TSS region transcription start site region 154130
Gm37216 18 84372669 to 84376146 3477 - unclassified gene predicted gene, 37216
Tssr152210 18 84386124 to 84386125 1 + TSS region transcription start site region 152210
Tssr154131 18 84412389 to 84412398 9 - TSS region transcription start site region 154131
Tssr154132 18 84468645 to 84468648 3 - TSS region transcription start site region 154132
Gm31909 18 84476865 to 84485826 8961 - lncRNA gene predicted gene, 31909
Tssr154133 18 84518642 to 84518654 12 - TSS region transcription start site region 154133
Cpgi10340 18 84588564 to 84590174 1610 CpG island CpG island 10340
Tssr154134 18 84589460 to 84589486 26 - TSS region transcription start site region 154134
Tssr154135 18 84589491 to 84589527 36 - TSS region transcription start site region 154135
Tssr152211 18 84589781 to 84589808 27 + TSS region transcription start site region 152211
Tssr154136 18 84589916 to 84589943 27 - TSS region transcription start site region 154136
Cndp1 18 84610509 to 84650084 39575 - protein coding gene carnosine dipeptidase 1 (metallopeptidase M20 family)
D18Mit213 18 84620529 to 84620653 124 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 213
D18Mit214.2 18 84620744 to 84620884 140 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 214.2
D18Mit214 18 84620901 to 84621022 121 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 214
Tssr154137 18 84649924 to 84649953 29 - TSS region transcription start site region 154137
Gm7289 18 84658932 to 84659844 912 - pseudogene predicted gene 7289
Tssr154138 18 84659936 to 84659943 7 - TSS region transcription start site region 154138
Tssr154139 18 84664849 to 84664896 47 - TSS region transcription start site region 154139
Cndp2 18 84667470 to 84685633 18163 - protein coding gene CNDP dipeptidase 2 (metallopeptidase M20 family)
Cpgi10341 18 84669755 to 84669923 168 CpG island CpG island 10341
Tssr154140 18 84669875 to 84669887 12 - TSS region transcription start site region 154140
Cpgi10342 18 84670706 to 84670963 257 CpG island CpG island 10342
Tssr154141 18 84675297 to 84675317 20 - TSS region transcription start site region 154141
Tssr154142 18 84676674 to 84676679 5 - TSS region transcription start site region 154142
Tssr154143 18 84679097 to 84679106 9 - TSS region transcription start site region 154143
Tssr154144 18 84680587 to 84680591 4 - TSS region transcription start site region 154144
Tssr154145 18 84681966 to 84682032 66 - TSS region transcription start site region 154145
Tssr154146 18 84682045 to 84682056 11 - TSS region transcription start site region 154146
2900046H12Rik 18 84683156 to 84683723 567 unclassified gene RIKEN cDNA 2900046H12 gene
Cpgi10343 18 84684913 to 84686007 1094 CpG island CpG island 10343
Tssr154147 18 84685615 to 84685671 56 - TSS region transcription start site region 154147