Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:83466412-84706440

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101 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obsty4 18 39486861 to 84620653 45133792 QTL obesity 4
Pas7 18 72612523 to 84126470 11513947 QTL pulmonary adenoma susceptibility 7
Idd21.1 18 74429267 to 84126470 9697203 QTL insulin dependent diabetes susceptibility 21.1
Gm31565 18 83482021 to 83484873 2852 - lncRNA gene predicted gene, 31565
Gm7569 18 83487854 to 83488835 981 - pseudogene predicted gene 7569
Tssr154101 18 83488831 to 83488836 5 - TSS region transcription start site region 154101
Tssr154102 18 83525291 to 83525305 14 - TSS region transcription start site region 154102
Tssr5392 18 83559733 to 83559741 8 + TSS region transcription start site region 5392
Gm31621 18 83628280 to 83637968 9688 - lncRNA gene predicted gene, 31621
Tssr154103 18 83637935 to 83637943 8 - TSS region transcription start site region 154103
D18Mit195 18 83697900 to 83698122 222 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 195
D18Mit190 18 83719703 to 83719949 246 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 190
Tssr154104 18 83753405 to 83753409 4 - TSS region transcription start site region 154104
Tssr154105 18 83754182 to 83754206 24 - TSS region transcription start site region 154105
D18Mit6 18 83762723 to 83762865 142 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 6
D18Mit1 18 83762742 to 83762895 153 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 1
Tssr154106 18 83764939 to 83764985 46 - TSS region transcription start site region 154106
Tssr154107 18 83768068 to 83768084 16 - TSS region transcription start site region 154107
Tssr154108 18 83768104 to 83768109 5 - TSS region transcription start site region 154108
Tssr154109 18 83768125 to 83768147 22 - TSS region transcription start site region 154109
Tssr154110 18 83768148 to 83768151 3 - TSS region transcription start site region 154110
Tssr154111 18 83768165 to 83768172 7 - TSS region transcription start site region 154111
Tssr152200 18 83813003 to 83813009 6 + TSS region transcription start site region 152200
Tssr154112 18 83826781 to 83826807 26 - TSS region transcription start site region 154112
Tssr154113 18 83827603 to 83827608 5 - TSS region transcription start site region 154113
Tssr154114 18 83828051 to 83828081 30 - TSS region transcription start site region 154114
Tssr154115 18 83828093 to 83828114 21 - TSS region transcription start site region 154115
Tssr154116 18 83828489 to 83828517 28 - TSS region transcription start site region 154116
Cpgi10334 18 83859273 to 83859452 179 CpG island CpG island 10334
Gm31707 18 83943330 to 83959067 15737 + lncRNA gene predicted gene, 31707
Gm31792 18 83980608 to 84003622 23014 - lncRNA gene predicted gene, 31792
Tssr152201 18 83996324 to 83996329 5 + TSS region transcription start site region 152201
Cpgi10335 18 83996876 to 83997136 260 CpG island CpG island 10335
Tshz1 18 84011627 to 84086404 74777 - protein coding gene teashirt zinc finger family member 1
Tssr154117 18 84012362 to 84012396 34 - TSS region transcription start site region 154117
Tssr154118 18 84037396 to 84037401 5 - TSS region transcription start site region 154118
Tssr154119 18 84058095 to 84058112 17 - TSS region transcription start site region 154119
Cpgi10336 18 84085023 to 84086398 1375 CpG island CpG island 10336
Tssr154120 18 84085970 to 84085991 21 - TSS region transcription start site region 154120
Tssr154121 18 84086257 to 84086269 12 - TSS region transcription start site region 154121
Tssr154122 18 84086379 to 84086403 24 - TSS region transcription start site region 154122
Tssr154123 18 84086412 to 84086440 28 - TSS region transcription start site region 154123
Tssr154124 18 84086449 to 84086491 42 - TSS region transcription start site region 154124
Tssr154125 18 84086746 to 84086758 12 - TSS region transcription start site region 154125
Cpgi10337 18 84087221 to 84088999 1778 CpG island CpG island 10337
Tssr152202 18 84087647 to 84087687 40 + TSS region transcription start site region 152202
Tssr154126 18 84087702 to 84087716 14 - TSS region transcription start site region 154126
Tssr152203 18 84088077 to 84088178 101 + TSS region transcription start site region 152203
Zadh2 18 84088158 to 84097514 9356 + protein coding gene zinc binding alcohol dehydrogenase, domain containing 2
Tssr152204 18 84088186 to 84088206 20 + TSS region transcription start site region 152204
Tssr152205 18 84088218 to 84088243 25 + TSS region transcription start site region 152205
Tssr152206 18 84088680 to 84088693 13 + TSS region transcription start site region 152206
Tssr152207 18 84091814 to 84091827 13 + TSS region transcription start site region 152207
Cpgi10338 18 84091822 to 84092426 604 CpG island CpG island 10338
Gm31854 18 84097626 to 84100872 3246 - lncRNA gene predicted gene, 31854
Tssr154127 18 84099346 to 84099385 39 - TSS region transcription start site region 154127
Tssr5393 18 84101933 to 84101934 1 + TSS region transcription start site region 5393
Hdlq31 18 84126264 to 84126470 206 QTL HDL QTL 31
D18Mit4 18 84126264 to 84126470 206 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 4
Cpgi10339 18 84162455 to 84163174 719 CpG island CpG island 10339
Zfp407 18 84207701 to 84589539 381838 - protein coding gene zinc finger protein 407
Tssr154128 18 84243258 to 84243262 4 - TSS region transcription start site region 154128
Tssr5394 18 84251528 to 84251530 2 + TSS region transcription start site region 5394
D18Mit115 18 84260946 to 84261117 171 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 115
A130068F13Rik 18 84262945 to 84266500 3555 unclassified gene RIKEN cDNA A130068F13 gene
Tssr152208 18 84293188 to 84293205 17 + TSS region transcription start site region 152208
Tssr152209 18 84293219 to 84293236 17 + TSS region transcription start site region 152209
Tssr154129 18 84301280 to 84301314 34 - TSS region transcription start site region 154129
Tssr154130 18 84339533 to 84339552 19 - TSS region transcription start site region 154130
Gm37216 18 84372669 to 84376146 3477 - unclassified gene predicted gene, 37216
Tssr152210 18 84386124 to 84386125 1 + TSS region transcription start site region 152210
Tssr154131 18 84412389 to 84412398 9 - TSS region transcription start site region 154131
Tssr154132 18 84468645 to 84468648 3 - TSS region transcription start site region 154132
Gm31909 18 84476865 to 84485826 8961 - lncRNA gene predicted gene, 31909
Tssr154133 18 84518642 to 84518654 12 - TSS region transcription start site region 154133
Cpgi10340 18 84588564 to 84590174 1610 CpG island CpG island 10340
Tssr154134 18 84589460 to 84589486 26 - TSS region transcription start site region 154134
Tssr154135 18 84589491 to 84589527 36 - TSS region transcription start site region 154135
Tssr152211 18 84589781 to 84589808 27 + TSS region transcription start site region 152211
Tssr154136 18 84589916 to 84589943 27 - TSS region transcription start site region 154136
Cndp1 18 84610509 to 84650084 39575 - protein coding gene carnosine dipeptidase 1 (metallopeptidase M20 family)
D18Mit213 18 84620529 to 84620653 124 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 213
D18Mit214.2 18 84620744 to 84620884 140 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 214.2
D18Mit214 18 84620901 to 84621022 121 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 214
Tssr154137 18 84649924 to 84649953 29 - TSS region transcription start site region 154137
Gm7289 18 84658932 to 84659844 912 - pseudogene predicted gene 7289
Tssr154138 18 84659936 to 84659943 7 - TSS region transcription start site region 154138
Tssr154139 18 84664849 to 84664896 47 - TSS region transcription start site region 154139
Cndp2 18 84667470 to 84685633 18163 - protein coding gene CNDP dipeptidase 2 (metallopeptidase M20 family)
Cpgi10341 18 84669755 to 84669923 168 CpG island CpG island 10341
Tssr154140 18 84669875 to 84669887 12 - TSS region transcription start site region 154140
Cpgi10342 18 84670706 to 84670963 257 CpG island CpG island 10342
Tssr154141 18 84675297 to 84675317 20 - TSS region transcription start site region 154141
Tssr154142 18 84676674 to 84676679 5 - TSS region transcription start site region 154142
Tssr154143 18 84679097 to 84679106 9 - TSS region transcription start site region 154143
Tssr154144 18 84680587 to 84680591 4 - TSS region transcription start site region 154144
Tssr154145 18 84681966 to 84682032 66 - TSS region transcription start site region 154145
Tssr154146 18 84682045 to 84682056 11 - TSS region transcription start site region 154146
2900046H12Rik 18 84683156 to 84683723 567 unclassified gene RIKEN cDNA 2900046H12 gene
Cpgi10343 18 84684913 to 84686007 1094 CpG island CpG island 10343
Tssr154147 18 84685615 to 84685671 56 - TSS region transcription start site region 154147