Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:82808154-83020235

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D18Mit43 18 82842877 to 82842999 122 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 43
Cpgi10326 18 82855420 to 82855854 434 CpG island CpG island 10326
Tssr152186 18 82855894 to 82855898 4 + TSS region transcription start site region 152186
4930445N18Rik 18 82855897 to 82859162 3265 + lincRNA gene RIKEN cDNA 4930445N18 gene
Gm30889 18 82902025 to 82905676 3651 + lncRNA gene predicted gene, 30889
Tssr152187 18 82902042 to 82902051 9 + TSS region transcription start site region 152187
Tssr152188 18 82902088 to 82902100 12 + TSS region transcription start site region 152188
D18Mit108 18 82905707 to 82905828 121 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 108
Cpgi10327 18 82909425 to 82911781 2356 CpG island CpG island 10327
Tssr152189 18 82910589 to 82910645 56 + TSS region transcription start site region 152189
Tssr152190 18 82910658 to 82910678 20 + TSS region transcription start site region 152190
Tssr152191 18 82910839 to 82910862 23 + TSS region transcription start site region 152191
Tssr152192 18 82910863 to 82910885 22 + TSS region transcription start site region 152192
Zfp516 18 82910879 to 83005314 94435 + protein coding gene zinc finger protein 516
Tssr152193 18 82910886 to 82910901 15 + TSS region transcription start site region 152193
Tssr152194 18 82910913 to 82910943 30 + TSS region transcription start site region 152194
Tssr152195 18 82911326 to 82911333 7 + TSS region transcription start site region 152195
Cpgi10328 18 82913154 to 82915235 2081 CpG island CpG island 10328
Tssr152196 18 82914638 to 82914664 26 + TSS region transcription start site region 152196
4930592I03Rik 18 82918405 to 82920560 2155 - lncRNA gene RIKEN cDNA 4930592I03 gene
Tssr154097 18 82920534 to 82920551 17 - TSS region transcription start site region 154097
Tssr152197 18 82972771 to 82972793 22 + TSS region transcription start site region 152197
Tssr5391 18 82997082 to 82997087 5 + TSS region transcription start site region 5391
Gm41795 18 83011180 to 83032019 20839 + lncRNA gene predicted gene, 41795