Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:82674222-82854589

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp236 18 82593593 to 82692883 99290 - protein coding gene zinc finger protein 236
Tssr154092 18 82687025 to 82687041 16 - TSS region transcription start site region 154092
Cpgi10321 18 82691593 to 82693369 1776 CpG island CpG island 10321
Gm10524 18 82692284 to 82694176 1892 + protein coding gene predicted gene 10524
Tssr152179 18 82692517 to 82692550 33 + TSS region transcription start site region 152179
Tssr152180 18 82692551 to 82692567 16 + TSS region transcription start site region 152180
Tssr152181 18 82692572 to 82692586 14 + TSS region transcription start site region 152181
Tssr152182 18 82692589 to 82692630 41 + TSS region transcription start site region 152182
Tssr5389 18 82692639 to 82692647 8 + TSS region transcription start site region 5389
Tssr154093 18 82692873 to 82692933 60 - TSS region transcription start site region 154093
Tssr152183 18 82692929 to 82692950 21 + TSS region transcription start site region 152183
Tssr152184 18 82692955 to 82692986 31 + TSS region transcription start site region 152184
Gm46620 18 82697314 to 82701315 4001 + protein coding gene predicted gene, 46620
Tssr5390 18 82705049 to 82705073 24 + TSS region transcription start site region 5390
Gm41793 18 82712854 to 82728751 15897 - protein coding gene predicted gene, 41793
Cpgi10322 18 82716655 to 82716862 207 CpG island CpG island 10322
Mir5112 18 82720281 to 82720340 59 + miRNA gene microRNA 5112
Cpgi10323 18 82729820 to 82730232 412 CpG island CpG island 10323
Cpgi10324 18 82751243 to 82751477 234 CpG island CpG island 10324
2210420H20Rik 18 82754505 to 82759039 4534 - lincRNA gene RIKEN cDNA 2210420H20 gene
Tssr154094 18 82759781 to 82759792 11 - TSS region transcription start site region 154094
Cpgi10325 18 82764222 to 82764589 367 CpG island CpG island 10325
Gm46638 18 82765264 to 82786849 21585 + lncRNA gene predicted gene, 46638
Tssr152185 18 82767286 to 82767319 33 + TSS region transcription start site region 152185
Tssr154095 18 82787601 to 82787614 13 - TSS region transcription start site region 154095
Tssr154096 18 82798762 to 82798788 26 - TSS region transcription start site region 154096
D18Mit43 18 82842877 to 82842999 122 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 43