Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:82242496-82556777

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D18Mit143 18 82320746 to 82320865 119 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 143
Tssr154073 18 82332344 to 82332353 9 - TSS region transcription start site region 154073
B020010K11Rik 18 82336249 to 82361599 25350 unclassified non-coding RNA gene RIKEN cDNA B020010K11 gene
Tssr152129 18 82338354 to 82338357 3 + TSS region transcription start site region 152129
Gm17383 18 82338774 to 82339816 1042 + pseudogene predicted gene, 17383
Gm25060 18 82355977 to 82356106 129 - snRNA gene predicted gene, 25060
4930520A20Rik 18 82386876 to 82387585 709 unclassified gene RIKEN cDNA 4930520A20 gene
Galr1 18 82392496 to 82406777 14281 - protein coding gene galanin receptor 1
Cpgi10318 18 82405499 to 82407524 2025 CpG island CpG island 10318
Gm30642 18 82407336 to 82410957 3621 + lncRNA gene predicted gene, 30642
D18Mit215 18 82413493 to 82413681 188 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 215
Cpgi10319 18 82474666 to 82476207 1541 CpG island CpG island 10319
Tssr152130 18 82475081 to 82475103 22 + TSS region transcription start site region 152130
Tssr152131 18 82475133 to 82475151 18 + TSS region transcription start site region 152131
Mbp 18 82475146 to 82585637 110491 + protein coding gene myelin basic protein
Tssr152132 18 82475157 to 82475170 13 + TSS region transcription start site region 152132
Tssr152133 18 82475180 to 82475196 16 + TSS region transcription start site region 152133
Tssr152134 18 82475205 to 82475232 27 + TSS region transcription start site region 152134
Tssr152135 18 82475235 to 82475255 20 + TSS region transcription start site region 152135
Tssr152136 18 82475302 to 82475309 7 + TSS region transcription start site region 152136
Tssr152137 18 82475998 to 82476054 56 + TSS region transcription start site region 152137
Tssr154074 18 82477108 to 82477117 9 - TSS region transcription start site region 154074
D18Mit101 18 82489050 to 82489192 142 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 101
D18Mit155 18 82491178 to 82491480 302 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 155
Rpl21-ps8 18 82523544 to 82524021 477 - pseudogene ribosomal protein L21, pseudogene 8
Tssr154075 18 82525858 to 82525895 37 - TSS region transcription start site region 154075
Tssr154076 18 82525928 to 82525960 32 - TSS region transcription start site region 154076
Tssr154077 18 82527740 to 82527750 10 - TSS region transcription start site region 154077
Tssr154078 18 82527768 to 82527773 5 - TSS region transcription start site region 154078
Tssr154079 18 82527786 to 82527791 5 - TSS region transcription start site region 154079
Tssr152138 18 82537124 to 82537135 11 + TSS region transcription start site region 152138
Tssr152139 18 82537605 to 82537617 12 + TSS region transcription start site region 152139
Tssr152140 18 82537649 to 82537705 56 + TSS region transcription start site region 152140
Tssr152141 18 82539700 to 82539703 3 + TSS region transcription start site region 152141
Tssr152142 18 82543949 to 82543952 3 + TSS region transcription start site region 152142
Tssr152143 18 82554521 to 82554539 18 + TSS region transcription start site region 152143
Cpgi10320 18 82554636 to 82554998 362 CpG island CpG island 10320
Tssr154080 18 82554685 to 82554697 12 - TSS region transcription start site region 154080