Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:81117572-82207760

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W3q16 18 61139376 to 81448616 20309240 QTL weight 3 weeks QTL 16
Tssr5388 18 81117805 to 81117820 15 + TSS region transcription start site region 5388
Tssr152124 18 81117887 to 81117897 10 + TSS region transcription start site region 152124
Tssr152125 18 81130466 to 81130472 6 + TSS region transcription start site region 152125
Tssr152126 18 81200002 to 81200008 6 + TSS region transcription start site region 152126
Cpgi10314 18 81211009 to 81211181 172 CpG island CpG island 10314
4930594M17Rik 18 81226204 to 81236066 9862 - lincRNA gene RIKEN cDNA 4930594M17 gene
Gm30192 18 81264674 to 81330128 65454 + lncRNA gene predicted gene, 30192
D18Mit127 18 81306381 to 81306522 141 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 127
Tssr152127 18 81387698 to 81387699 1 + TSS region transcription start site region 152127
Gm30288 18 81434933 to 81457605 22672 - lncRNA gene predicted gene, 30288
D18Mit2 18 81448490 to 81448616 126 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 2
D18Mit3 18 81448513 to 81448616 103 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 3
Tssr154061 18 81566214 to 81566215 1 - TSS region transcription start site region 154061
Tssr154062 18 81589258 to 81589262 4 - TSS region transcription start site region 154062
Gm41792 18 81629242 to 81637651 8409 - lncRNA gene predicted gene, 41792
D18Mit5 18 81662572 to 81662760 188 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 5
Gm46614 18 81772077 to 81819086 47009 + lncRNA gene predicted gene, 46614
Gm30454 18 81844358 to 81849958 5600 - lncRNA gene predicted gene, 30454
Cpgi10315 18 81916181 to 81916707 526 CpG island CpG island 10315
Tssr154063 18 81924111 to 81924150 39 - TSS region transcription start site region 154063
Gm30513 18 81924531 to 81927638 3107 - lncRNA gene predicted gene, 30513
Tssr154064 18 81924747 to 81924760 13 - TSS region transcription start site region 154064
Tssr154065 18 81927206 to 81927241 35 - TSS region transcription start site region 154065
Cpgi10316 18 81927375 to 81927699 324 CpG island CpG island 10316
Tssr154066 18 81927420 to 81927431 11 - TSS region transcription start site region 154066
Tssr154067 18 81927475 to 81927484 9 - TSS region transcription start site region 154067
Tssr154068 18 81927637 to 81927640 3 - TSS region transcription start site region 154068
Tssr154069 18 81927644 to 81927662 18 - TSS region transcription start site region 154069
Tssr154070 18 81927669 to 81927672 3 - TSS region transcription start site region 154070
Tssr154071 18 81927687 to 81927696 9 - TSS region transcription start site region 154071
Tssr154072 18 81927708 to 81927709 1 - TSS region transcription start site region 154072
Gm30593 18 81933976 to 81960508 26532 + lncRNA gene predicted gene, 30593
Tssr152128 18 81939930 to 81939940 10 + TSS region transcription start site region 152128
Gm26012 18 81981069 to 81981196 127 + snoRNA gene predicted gene, 26012
Mir5127 18 81992010 to 81992080 70 - miRNA gene microRNA 5127
D18Mit44 18 82113893 to 82114037 144 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 44