Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:80735914-80985922

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp9b 18 80734141 to 80934058 199917 - protein coding gene ATPase, class II, type 9B
Tssr154046 18 80738301 to 80738311 10 - TSS region transcription start site region 154046
Tssr154047 18 80743000 to 80743008 8 - TSS region transcription start site region 154047
Tssr154048 18 80743010 to 80743026 16 - TSS region transcription start site region 154048
Tssr154049 18 80743033 to 80743040 7 - TSS region transcription start site region 154049
Tssr154050 18 80743049 to 80743061 12 - TSS region transcription start site region 154050
Tssr5386 18 80791048 to 80791049 1 + TSS region transcription start site region 5386
Gm47272 18 80822247 to 80838491 16244 + antisense lncRNA gene predicted gene, 47272
Gm47273 18 80854309 to 80854727 418 + pseudogene predicted gene, 47273
Tssr154051 18 80860914 to 80860922 8 - TSS region transcription start site region 154051
Tssr154052 18 80860936 to 80860952 16 - TSS region transcription start site region 154052
Tssr154053 18 80860954 to 80860963 9 - TSS region transcription start site region 154053
Tssr154054 18 80869685 to 80869689 4 - TSS region transcription start site region 154054
Tssr154055 18 80901405 to 80901409 4 - TSS region transcription start site region 154055
Gm25071 18 80925736 to 80925805 69 - miRNA gene predicted gene, 25071
Cpgi10310 18 80933379 to 80934370 991 CpG island CpG island 10310
Tssr154056 18 80933973 to 80934045 72 - TSS region transcription start site region 154056
Tssr154057 18 80934054 to 80934077 23 - TSS region transcription start site region 154057
Sall3 18 80966376 to 80986578 20202 - protein coding gene spalt like transcription factor 3
Tssr154058 18 80968851 to 80968855 4 - TSS region transcription start site region 154058
Cpgi10311 18 80973854 to 80974704 850 CpG island CpG island 10311
Gm27238 18 80978913 to 80987869 8956 - sense overlapping lncRNA gene predicted gene 27238
Cpgi10312 18 80985281 to 80988432 3151 CpG island CpG island 10312