Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:80480125-84690139

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372 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obsty4 18 39486861 to 84620653 45133792 QTL obesity 4
Eae18 18 57457487 to 82586603 25129116 QTL experimental allergic encephalomyelitis susceptibility 18
Orgwq9 18 61139376 to 82586603 21447227 QTL organ weight QTL 9
W3q16 18 61139376 to 81448616 20309240 QTL weight 3 weeks QTL 16
Pas7 18 72612523 to 84126470 11513947 QTL pulmonary adenoma susceptibility 7
Idd21.1 18 74429267 to 84126470 9697203 QTL insulin dependent diabetes susceptibility 21.1
Gm30020 18 80500125 to 80528162 28037 - lncRNA gene predicted gene, 30020
Tssr154030 18 80502496 to 80502499 3 - TSS region transcription start site region 154030
Gm41788 18 80528234 to 80530719 2485 + lncRNA gene predicted gene, 41788
D18Mit212 18 80539932 to 80540055 123 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 212
Gm2176 18 80541892 to 80544546 2654 - pseudogene predicted gene 2176
Tssr154031 18 80554780 to 80554797 17 - TSS region transcription start site region 154031
Cpgi10304 18 80554893 to 80555107 214 CpG island CpG island 10304
Tssr152111 18 80555190 to 80555193 3 + TSS region transcription start site region 152111
Tssr152112 18 80555227 to 80555233 6 + TSS region transcription start site region 152112
Gm41790 18 80571824 to 80605936 34112 - lncRNA gene predicted gene, 41790
Tssr154032 18 80597552 to 80597560 8 - TSS region transcription start site region 154032
Tssr154033 18 80597561 to 80597574 13 - TSS region transcription start site region 154033
Nfatc1 18 80606205 to 80713071 106866 - protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
Tssr154034 18 80608459 to 80608478 19 - TSS region transcription start site region 154034
Cpgi10305 18 80608547 to 80608701 154 CpG island CpG island 10305
Tssr152113 18 80608622 to 80608628 6 + TSS region transcription start site region 152113
Tssr154035 18 80609711 to 80609723 12 - TSS region transcription start site region 154035
Tssr152114 18 80609815 to 80609835 20 + TSS region transcription start site region 152114
Tssr154036 18 80611193 to 80611221 28 - TSS region transcription start site region 154036
Tssr154037 18 80611709 to 80611715 6 - TSS region transcription start site region 154037
Tssr152115 18 80612484 to 80612497 13 + TSS region transcription start site region 152115
1700017H01Rik 18 80629446 to 80630798 1352 unclassified gene RIKEN cDNA 1700017H01 gene
Tssr154038 18 80673856 to 80673860 4 - TSS region transcription start site region 154038
Tssr152116 18 80678784 to 80678788 4 + TSS region transcription start site region 152116
Cpgi10306 18 80690026 to 80690261 235 CpG island CpG island 10306
Tssr154039 18 80698172 to 80698190 18 - TSS region transcription start site region 154039
Tssr154040 18 80698390 to 80698402 12 - TSS region transcription start site region 154040
Tssr152117 18 80705024 to 80705029 5 + TSS region transcription start site region 152117
Tssr152118 18 80707227 to 80707239 12 + TSS region transcription start site region 152118
Tssr152119 18 80707262 to 80707269 7 + TSS region transcription start site region 152119
Tssr152120 18 80707272 to 80707286 14 + TSS region transcription start site region 152120
Cpgi10307 18 80707323 to 80708742 1419 CpG island CpG island 10307
Tssr154041 18 80708084 to 80708091 7 - TSS region transcription start site region 154041
Tssr154042 18 80708115 to 80708180 65 - TSS region transcription start site region 154042
Tssr154043 18 80708184 to 80708194 10 - TSS region transcription start site region 154043
Tssr152121 18 80708288 to 80708301 13 + TSS region transcription start site region 152121
Cpgi10308 18 80712085 to 80713978 1893 CpG island CpG island 10308
Tssr154044 18 80713062 to 80713080 18 - TSS region transcription start site region 154044
Tssr154045 18 80713571 to 80713590 19 - TSS region transcription start site region 154045
Cpgi10309 18 80714256 to 80715671 1415 CpG island CpG island 10309
Tssr152122 18 80715074 to 80715088 14 + TSS region transcription start site region 152122
Tssr152123 18 80715371 to 80715382 11 + TSS region transcription start site region 152123
Atp9b 18 80734141 to 80934058 199917 - protein coding gene ATPase, class II, type 9B
Tssr154046 18 80738301 to 80738311 10 - TSS region transcription start site region 154046
Tssr154047 18 80743000 to 80743008 8 - TSS region transcription start site region 154047
Tssr154048 18 80743010 to 80743026 16 - TSS region transcription start site region 154048
Tssr154049 18 80743033 to 80743040 7 - TSS region transcription start site region 154049
Tssr154050 18 80743049 to 80743061 12 - TSS region transcription start site region 154050
Tssr5386 18 80791048 to 80791049 1 + TSS region transcription start site region 5386
Gm47272 18 80822247 to 80838491 16244 + antisense lncRNA gene predicted gene, 47272
Gm47273 18 80854309 to 80854727 418 + pseudogene predicted gene, 47273
Tssr154051 18 80860914 to 80860922 8 - TSS region transcription start site region 154051
Tssr154052 18 80860936 to 80860952 16 - TSS region transcription start site region 154052
Tssr154053 18 80860954 to 80860963 9 - TSS region transcription start site region 154053
Tssr154054 18 80869685 to 80869689 4 - TSS region transcription start site region 154054
Tssr154055 18 80901405 to 80901409 4 - TSS region transcription start site region 154055
Gm25071 18 80925736 to 80925805 69 - miRNA gene predicted gene, 25071
Cpgi10310 18 80933379 to 80934370 991 CpG island CpG island 10310
Tssr154056 18 80933973 to 80934045 72 - TSS region transcription start site region 154056
Tssr154057 18 80934054 to 80934077 23 - TSS region transcription start site region 154057
Sall3 18 80966376 to 80986578 20202 - protein coding gene spalt like transcription factor 3
Tssr154058 18 80968851 to 80968855 4 - TSS region transcription start site region 154058
Cpgi10311 18 80973854 to 80974704 850 CpG island CpG island 10311
Gm27238 18 80978913 to 80987869 8956 - sense overlapping lncRNA gene predicted gene 27238
Cpgi10312 18 80985281 to 80988432 3151 CpG island CpG island 10312
Tssr154059 18 80987016 to 80987022 6 - TSS region transcription start site region 154059
Tssr154060 18 80987384 to 80987416 32 - TSS region transcription start site region 154060
Gm27239 18 80987456 to 80988575 1119 + antisense lncRNA gene predicted gene 27239
Cpgi10313 18 80992219 to 80992461 242 CpG island CpG island 10313
Gm7503 18 80996778 to 80997509 731 - pseudogene predicted gene 7503
Gm25718 18 81026773 to 81026890 117 + snRNA gene predicted gene, 25718
Tssr5387 18 81087518 to 81087524 6 + TSS region transcription start site region 5387
Tssr5388 18 81117805 to 81117820 15 + TSS region transcription start site region 5388
Tssr152124 18 81117887 to 81117897 10 + TSS region transcription start site region 152124
Tssr152125 18 81130466 to 81130472 6 + TSS region transcription start site region 152125
Tssr152126 18 81200002 to 81200008 6 + TSS region transcription start site region 152126
Cpgi10314 18 81211009 to 81211181 172 CpG island CpG island 10314
4930594M17Rik 18 81226204 to 81236066 9862 - lincRNA gene RIKEN cDNA 4930594M17 gene
Gm30192 18 81264674 to 81330128 65454 + lncRNA gene predicted gene, 30192
D18Mit127 18 81306381 to 81306522 141 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 127
Tssr152127 18 81387698 to 81387699 1 + TSS region transcription start site region 152127
Gm30288 18 81434933 to 81457605 22672 - lncRNA gene predicted gene, 30288
D18Mit2 18 81448490 to 81448616 126 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 2
D18Mit3 18 81448513 to 81448616 103 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 3
Tssr154061 18 81566214 to 81566215 1 - TSS region transcription start site region 154061
Tssr154062 18 81589258 to 81589262 4 - TSS region transcription start site region 154062
Gm41792 18 81629242 to 81637651 8409 - lncRNA gene predicted gene, 41792
D18Mit5 18 81662572 to 81662760 188 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 5
Gm46614 18 81772077 to 81819086 47009 + lncRNA gene predicted gene, 46614
Gm30454 18 81844358 to 81849958 5600 - lncRNA gene predicted gene, 30454
Cpgi10315 18 81916181 to 81916707 526 CpG island CpG island 10315
Tssr154063 18 81924111 to 81924150 39 - TSS region transcription start site region 154063
Gm30513 18 81924531 to 81927638 3107 - lncRNA gene predicted gene, 30513
Tssr154064 18 81924747 to 81924760 13 - TSS region transcription start site region 154064
Tssr154065 18 81927206 to 81927241 35 - TSS region transcription start site region 154065
Cpgi10316 18 81927375 to 81927699 324 CpG island CpG island 10316
Tssr154066 18 81927420 to 81927431 11 - TSS region transcription start site region 154066
Tssr154067 18 81927475 to 81927484 9 - TSS region transcription start site region 154067
Tssr154068 18 81927637 to 81927640 3 - TSS region transcription start site region 154068
Tssr154069 18 81927644 to 81927662 18 - TSS region transcription start site region 154069
Tssr154070 18 81927669 to 81927672 3 - TSS region transcription start site region 154070
Tssr154071 18 81927687 to 81927696 9 - TSS region transcription start site region 154071
Tssr154072 18 81927708 to 81927709 1 - TSS region transcription start site region 154072
Gm30593 18 81933976 to 81960508 26532 + lncRNA gene predicted gene, 30593
Tssr152128 18 81939930 to 81939940 10 + TSS region transcription start site region 152128
Gm26012 18 81981069 to 81981196 127 + snoRNA gene predicted gene, 26012
Mir5127 18 81992010 to 81992080 70 - miRNA gene microRNA 5127
D18Mit44 18 82113893 to 82114037 144 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 44
D18Mit143 18 82320746 to 82320865 119 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 143
Tssr154073 18 82332344 to 82332353 9 - TSS region transcription start site region 154073
B020010K11Rik 18 82336249 to 82361599 25350 unclassified non-coding RNA gene RIKEN cDNA B020010K11 gene
Tssr152129 18 82338354 to 82338357 3 + TSS region transcription start site region 152129
Gm17383 18 82338774 to 82339816 1042 + pseudogene predicted gene, 17383
Gm25060 18 82355977 to 82356106 129 - snRNA gene predicted gene, 25060
4930520A20Rik 18 82386876 to 82387585 709 unclassified gene RIKEN cDNA 4930520A20 gene
Galr1 18 82392496 to 82406777 14281 - protein coding gene galanin receptor 1
Cpgi10318 18 82405499 to 82407524 2025 CpG island CpG island 10318
Gm30642 18 82407336 to 82410957 3621 + lncRNA gene predicted gene, 30642
D18Mit215 18 82413493 to 82413681 188 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 215
Cpgi10319 18 82474666 to 82476207 1541 CpG island CpG island 10319
Tssr152130 18 82475081 to 82475103 22 + TSS region transcription start site region 152130
Tssr152131 18 82475133 to 82475151 18 + TSS region transcription start site region 152131
Mbp 18 82475146 to 82585637 110491 + protein coding gene myelin basic protein
Tssr152132 18 82475157 to 82475170 13 + TSS region transcription start site region 152132
Tssr152133 18 82475180 to 82475196 16 + TSS region transcription start site region 152133
Tssr152134 18 82475205 to 82475232 27 + TSS region transcription start site region 152134
Tssr152135 18 82475235 to 82475255 20 + TSS region transcription start site region 152135
Tssr152136 18 82475302 to 82475309 7 + TSS region transcription start site region 152136
Tssr152137 18 82475998 to 82476054 56 + TSS region transcription start site region 152137
Tssr154074 18 82477108 to 82477117 9 - TSS region transcription start site region 154074
D18Mit101 18 82489050 to 82489192 142 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 101
D18Mit155 18 82491178 to 82491480 302 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 155
Rpl21-ps8 18 82523544 to 82524021 477 - pseudogene ribosomal protein L21, pseudogene 8
Tssr154075 18 82525858 to 82525895 37 - TSS region transcription start site region 154075
Tssr154076 18 82525928 to 82525960 32 - TSS region transcription start site region 154076
Tssr154077 18 82527740 to 82527750 10 - TSS region transcription start site region 154077
Tssr154078 18 82527768 to 82527773 5 - TSS region transcription start site region 154078
Tssr154079 18 82527786 to 82527791 5 - TSS region transcription start site region 154079
Tssr152138 18 82537124 to 82537135 11 + TSS region transcription start site region 152138
Tssr152139 18 82537605 to 82537617 12 + TSS region transcription start site region 152139
Tssr152140 18 82537649 to 82537705 56 + TSS region transcription start site region 152140
Tssr152141 18 82539700 to 82539703 3 + TSS region transcription start site region 152141
Tssr152142 18 82543949 to 82543952 3 + TSS region transcription start site region 152142
Tssr152143 18 82554521 to 82554539 18 + TSS region transcription start site region 152143
Cpgi10320 18 82554636 to 82554998 362 CpG island CpG island 10320
Tssr154080 18 82554685 to 82554697 12 - TSS region transcription start site region 154080
Tssr152144 18 82559400 to 82559421 21 + TSS region transcription start site region 152144
Tssr152145 18 82561734 to 82561740 6 + TSS region transcription start site region 152145
Tssr152146 18 82561769 to 82561817 48 + TSS region transcription start site region 152146
Tssr152147 18 82564808 to 82564828 20 + TSS region transcription start site region 152147
Tssr152148 18 82572813 to 82572887 74 + TSS region transcription start site region 152148
Tssr154081 18 82572846 to 82572880 34 - TSS region transcription start site region 154081
Tssr152149 18 82575168 to 82575187 19 + TSS region transcription start site region 152149
Tssr154082 18 82575201 to 82575213 12 - TSS region transcription start site region 154082
Tssr152150 18 82575596 to 82575612 16 + TSS region transcription start site region 152150
Tssr152151 18 82579015 to 82579019 4 + TSS region transcription start site region 152151
Tssr152152 18 82584108 to 82584125 17 + TSS region transcription start site region 152152
Tssr152153 18 82584136 to 82584249 113 + TSS region transcription start site region 152153
Tssr154083 18 82584217 to 82584230 13 - TSS region transcription start site region 154083
Tssr154084 18 82584241 to 82584284 43 - TSS region transcription start site region 154084
Tssr152154 18 82584250 to 82584272 22 + TSS region transcription start site region 152154
Tssr152155 18 82584288 to 82584308 20 + TSS region transcription start site region 152155
Tssr152156 18 82584361 to 82584377 16 + TSS region transcription start site region 152156
Tssr152157 18 82584412 to 82584455 43 + TSS region transcription start site region 152157
Tssr152158 18 82584469 to 82584492 23 + TSS region transcription start site region 152158
Tssr152159 18 82584499 to 82584516 17 + TSS region transcription start site region 152159
Tssr154085 18 82584513 to 82584541 28 - TSS region transcription start site region 154085
Tssr152160 18 82584549 to 82584562 13 + TSS region transcription start site region 152160
Tssr152161 18 82584566 to 82584578 12 + TSS region transcription start site region 152161
Tssr152162 18 82584582 to 82584599 17 + TSS region transcription start site region 152162
Tssr152163 18 82584607 to 82584616 9 + TSS region transcription start site region 152163
Tssr152164 18 82584647 to 82584661 14 + TSS region transcription start site region 152164
Tssr152165 18 82584700 to 82584734 34 + TSS region transcription start site region 152165
Tssr152166 18 82584766 to 82584770 4 + TSS region transcription start site region 152166
Tssr152167 18 82584781 to 82584802 21 + TSS region transcription start site region 152167
Tssr152168 18 82584816 to 82584831 15 + TSS region transcription start site region 152168
Tssr152169 18 82584877 to 82584884 7 + TSS region transcription start site region 152169
Tssr152170 18 82584958 to 82584992 34 + TSS region transcription start site region 152170
Tssr152171 18 82585018 to 82585036 18 + TSS region transcription start site region 152171
Tssr154086 18 82585068 to 82585087 19 - TSS region transcription start site region 154086
Tssr152172 18 82585125 to 82585139 14 + TSS region transcription start site region 152172
Tssr152173 18 82585148 to 82585154 6 + TSS region transcription start site region 152173
Tssr152174 18 82585166 to 82585188 22 + TSS region transcription start site region 152174
Tssr152175 18 82585189 to 82585223 34 + TSS region transcription start site region 152175
Tssr154087 18 82585283 to 82585308 25 - TSS region transcription start site region 154087
Tssr154088 18 82585323 to 82585337 14 - TSS region transcription start site region 154088
Tssr152176 18 82585398 to 82585412 14 + TSS region transcription start site region 152176
Tssr154089 18 82585434 to 82585455 21 - TSS region transcription start site region 154089
Tssr154090 18 82585506 to 82585515 9 - TSS region transcription start site region 154090
Tssr152177 18 82585566 to 82585592 26 + TSS region transcription start site region 152177
D18Nds1 18 82586460 to 82586603 143 DNA segment DNA segment, Chr 18, Nuffield Department of Surgery 1
Zfp236 18 82593593 to 82692883 99290 - protein coding gene zinc finger protein 236
Tssr154091 18 82618870 to 82618888 18 - TSS region transcription start site region 154091
Tssr152178 18 82669160 to 82669170 10 + TSS region transcription start site region 152178