Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:80278622-80448667

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pqlc1 18 80255245 to 80292724 37479 + protein coding gene PQ loop repeat containing 1
Tssr152104 18 80278984 to 80279005 21 + TSS region transcription start site region 152104
Tssr152105 18 80279438 to 80279443 5 + TSS region transcription start site region 152105
Kcng2 18 80294546 to 80364254 69708 - protein coding gene potassium voltage-gated channel, subfamily G, member 2
Cpgi10299 18 80295492 to 80296574 1082 CpG island CpG island 10299
Gm37015 18 80302160 to 80303680 1520 - unclassified gene predicted gene, 37015
Tssr154016 18 80312979 to 80312984 5 - TSS region transcription start site region 154016
Gm29913 18 80316704 to 80320916 4212 + lncRNA gene predicted gene, 29913
Cpgi10300 18 80322197 to 80323373 1176 CpG island CpG island 10300
Gm26676 18 80323335 to 80326605 3270 + antisense lncRNA gene predicted gene, 26676
Cpgi10301 18 80337705 to 80337976 271 CpG island CpG island 10301
Tssr154017 18 80340981 to 80340984 3 - TSS region transcription start site region 154017
Tssr154018 18 80345736 to 80345745 9 - TSS region transcription start site region 154018
Tssr154019 18 80345845 to 80345880 35 - TSS region transcription start site region 154019
Tssr154020 18 80346069 to 80346089 20 - TSS region transcription start site region 154020
Tssr154021 18 80353763 to 80353767 4 - TSS region transcription start site region 154021
Cpgi10302 18 80362662 to 80364183 1521 CpG island CpG island 10302
Tssr152106 18 80362777 to 80362782 5 + TSS region transcription start site region 152106
D330025C20Rik 18 80362787 to 80365191 2404 + unclassified non-coding RNA gene RIKEN cDNA D330025C20 gene
Tssr154022 18 80363622 to 80363667 45 - TSS region transcription start site region 154022
Tssr154023 18 80363670 to 80363675 5 - TSS region transcription start site region 154023
Gm29967 18 80376437 to 80393421 16984 - lncRNA gene predicted gene, 29967
Ctdp1 18 80407959 to 80469695 61736 - protein coding gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Tssr154024 18 80440806 to 80440835 29 - TSS region transcription start site region 154024
Tssr154025 18 80440850 to 80440865 15 - TSS region transcription start site region 154025