MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:80116412-80186442

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pard6g	18	80046895 to 80119640	72745	+	protein coding gene	par-6 family cell polarity regulator gamma
Tssr154001	18	80124565 to 80124595	30	-	TSS region	transcription start site region 154001
Adnp2	18	80126311 to 80151482	25171	-	protein coding gene	ADNP homeobox 2
D18Mit129	18	80132049 to 80132186	137		DNA segment	DNA segment, Chr 18, Massachusetts Institute of Technology 129
Sicd1	18	80132049 to 89572790	9440741		QTL	seizure-induced cell death 1
D18Dcr9	18	80134389 to 80134484	95		DNA segment	DNA Segment, Chr 18, Derry C. Roopenian 9
Cpgi10293	18	80150657 to 80151905	1248		CpG island	CpG island 10293
Tssr154002	18	80151412 to 80151442	30	-	TSS region	transcription start site region 154002
Tssr154003	18	80151467 to 80151517	50	-	TSS region	transcription start site region 154003
Gm41787	18	80157919 to 80161499	3580	-	lncRNA gene	predicted gene, 41787
Cpgi10294	18	80162629 to 80163029	400		CpG island	CpG island 10294
Gm7447	18	80162752 to 80163514	762	+	pseudogene	predicted gene 7447
Tssr154004	18	80172914 to 80172950	36	-	TSS region	transcription start site region 154004
Tssr152090	18	80173097 to 80173120	23	+	TSS region	transcription start site region 152090
D18Dcr10	18	80184385 to 80184483	98		DNA segment	DNA Segment, Chr 18, Derry C. Roopenian 10
Tssr152091	18	80186222 to 80186231	9	+	TSS region	transcription start site region 152091
Tssr152092	18	80186233 to 80186245	12	+	TSS region	transcription start site region 152092
Rbfaos	18	80186239 to 80193569	7330	+	lncRNA gene	ribosome binding factor A, opposite strand