Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:7863253-9533356

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9993 18 7868017 to 7869112 1095 unclassified non-coding RNA gene predicted gene 9993
Cpgi9688 18 7868436 to 7870121 1685 CpG island CpG island 9688
Tssr149978 18 7868473 to 7868494 21 + TSS region transcription start site region 149978
Tssr149979 18 7868823 to 7868862 39 + TSS region transcription start site region 149979
Wac 18 7868832 to 7929028 60196 + protein coding gene WW domain containing adaptor with coiled-coil
Tssr149980 18 7868877 to 7868888 11 + TSS region transcription start site region 149980
Tssr152379 18 7869061 to 7869124 63 - TSS region transcription start site region 152379
Tssr149981 18 7869139 to 7869152 13 + TSS region transcription start site region 149981
Tssr149982 18 7869159 to 7869209 50 + TSS region transcription start site region 149982
Tssr149983 18 7869214 to 7869226 12 + TSS region transcription start site region 149983
Tssr149984 18 7869307 to 7869329 22 + TSS region transcription start site region 149984
Tssr149985 18 7869342 to 7869381 39 + TSS region transcription start site region 149985
Tssr149986 18 7869707 to 7869727 20 + TSS region transcription start site region 149986
Tssr149987 18 7869875 to 7869898 23 + TSS region transcription start site region 149987
Tssr149988 18 7877543 to 7877584 41 + TSS region transcription start site region 149988
A430102J17Rik 18 7894299 to 7895791 1492 unclassified gene RIKEN cDNA A430102J17 gene
Tssr149989 18 7901490 to 7901506 16 + TSS region transcription start site region 149989
Tssr149990 18 7905440 to 7905459 19 + TSS region transcription start site region 149990
Tssr149991 18 7916018 to 7916034 16 + TSS region transcription start site region 149991
Tssr149992 18 7916114 to 7916130 16 + TSS region transcription start site region 149992
Tssr5242 18 7926033 to 7926038 5 + TSS region transcription start site region 5242
Gm7502 18 7932782 to 7933514 732 + pseudogene predicted gene 7502
Gm4833 18 8051203 to 8051992 789 + pseudogene predicted gene 4833
Tssr152380 18 8138053 to 8138056 3 - TSS region transcription start site region 152380
Gm35031 18 8180579 to 8192719 12140 + lncRNA gene predicted gene, 35031
Gm20147 18 8227514 to 8228006 492 - pseudogene predicted gene, 20147
Gm5500 18 8415129 to 8416047 918 + pseudogene predicted pseudogene 5500
D18Mit164 18 8523874 to 8524023 149 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 164
Tssr5243 18 8562035 to 8562039 4 - TSS region transcription start site region 5243
Gm35180 18 8673921 to 8718016 44095 - lncRNA gene predicted gene, 35180
Gm35232 18 8679051 to 8679292 241 + pseudogene predicted gene, 35232
Gm5819 18 8694099 to 8694537 438 + protein coding gene predicted gene 5819
Gm26119 18 8698253 to 8698356 103 - miRNA gene predicted gene, 26119
Gm37148 18 8928235 to 8929826 1591 + unclassified gene predicted gene, 37148
Gm7523 18 8967744 to 8968796 1052 + pseudogene predicted gene 7523
Gm18526 18 9099708 to 9100255 547 - pseudogene predicted gene, 18526
Cpgi9689 18 9212018 to 9215049 3031 CpG island CpG island 9689
Tssr149993 18 9212154 to 9212171 17 + TSS region transcription start site region 149993
Tssr5244 18 9212184 to 9212193 9 + TSS region transcription start site region 5244
Tssr149994 18 9212197 to 9212200 3 + TSS region transcription start site region 149994
Fzd8 18 9212856 to 9216201 3345 + protein coding gene frizzled class receptor 8
Gjd4 18 9278607 to 9282809 4202 - protein coding gene gap junction protein, delta 4
Cpgi9690 18 9280476 to 9280896 420 CpG island CpG island 9690
Tssr152381 18 9282718 to 9282739 21 - TSS region transcription start site region 152381
Tssr152382 18 9282754 to 9282766 12 - TSS region transcription start site region 152382
Gm50053 18 9304635 to 9305080 445 + pseudogene predicted gene, 50053
Ccny 18 9314044 to 9450150 136106 - protein coding gene cyclin Y
Tssr152383 18 9315369 to 9315381 12 - TSS region transcription start site region 152383
Tssr152384 18 9329954 to 9329958 4 - TSS region transcription start site region 152384
Tssr152385 18 9376803 to 9376807 4 - TSS region transcription start site region 152385
Tssr152386 18 9400373 to 9400378 5 - TSS region transcription start site region 152386
Tssr152387 18 9414745 to 9414749 4 - TSS region transcription start site region 152387
Gm50055 18 9434823 to 9436850 2027 - unclassified gene predicted gene, 50055
Tssr152388 18 9437455 to 9437477 22 - TSS region transcription start site region 152388
Cpgi9691 18 9449073 to 9450559 1486 CpG island CpG island 9691
Tssr152389 18 9449593 to 9449600 7 - TSS region transcription start site region 152389
Tssr152390 18 9449947 to 9450043 96 - TSS region transcription start site region 152390
Tssr152391 18 9450050 to 9450061 11 - TSS region transcription start site region 152391
Tssr152392 18 9450066 to 9450075 9 - TSS region transcription start site region 152392
Tssr152393 18 9450097 to 9450161 64 - TSS region transcription start site region 152393
Tssr152394 18 9450163 to 9450174 11 - TSS region transcription start site region 152394
Tssr149995 18 9450277 to 9450298 21 + TSS region transcription start site region 149995
Gm35458 18 9465050 to 9471153 6103 - lncRNA gene predicted gene, 35458
Tssr152395 18 9485344 to 9485349 5 - TSS region transcription start site region 152395
Tssr149996 18 9485620 to 9485655 35 + TSS region transcription start site region 149996
Tssr149997 18 9487587 to 9487595 8 + TSS region transcription start site region 149997
Tssr149998 18 9490007 to 9490010 3 + TSS region transcription start site region 149998
Tssr149999 18 9494667 to 9494677 10 + TSS region transcription start site region 149999
Gm7527 18 9495621 to 9496509 888 + pseudogene predicted gene 7527
Tssr150000 18 9505516 to 9505527 11 + TSS region transcription start site region 150000
Tssr150001 18 9505678 to 9505686 8 + TSS region transcription start site region 150001
Tssr152396 18 9508207 to 9508243 36 - TSS region transcription start site region 152396
Tssr152397 18 9508510 to 9508534 24 - TSS region transcription start site region 152397