Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:77850889-78560917

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pstpip2 18 77794545 to 77882007 87462 + protein coding gene proline-serine-threonine phosphatase-interacting protein 2
Tssr152060 18 77870230 to 77870260 30 + TSS region transcription start site region 152060
Tssr152061 18 77870266 to 77870306 40 + TSS region transcription start site region 152061
Tssr152062 18 77875336 to 77875373 37 + TSS region transcription start site region 152062
Tssr152063 18 77875399 to 77875408 9 + TSS region transcription start site region 152063
Tssr152064 18 77879496 to 77879524 28 + TSS region transcription start site region 152064
Tssr152065 18 77879531 to 77879541 10 + TSS region transcription start site region 152065
Tssr152066 18 77882188 to 77882204 16 + TSS region transcription start site region 152066
Tssr152067 18 77882220 to 77882232 12 + TSS region transcription start site region 152067
Tssr152068 18 77882250 to 77882261 11 + TSS region transcription start site region 152068
Tssr152069 18 77882351 to 77882362 11 + TSS region transcription start site region 152069
Tssr152070 18 77882466 to 77882477 11 + TSS region transcription start site region 152070
Tssr152071 18 77882497 to 77882515 18 + TSS region transcription start site region 152071
Tssr152072 18 77882518 to 77882546 28 + TSS region transcription start site region 152072
Tssr152073 18 77882551 to 77882564 13 + TSS region transcription start site region 152073
Tssr152074 18 77882580 to 77882587 7 + TSS region transcription start site region 152074
Tssr152075 18 77882600 to 77882616 16 + TSS region transcription start site region 152075
Cpgi10283 18 77938155 to 77938846 691 CpG island CpG island 10283
Tssr152076 18 77938421 to 77938451 30 + TSS region transcription start site region 152076
Tssr152077 18 77938452 to 77938477 25 + TSS region transcription start site region 152077
Epg5 18 77938467 to 78035027 96560 + protein coding gene ectopic P-granules autophagy protein 5 homolog (C. elegans)
Tssr5383 18 77948839 to 77948864 25 + TSS region transcription start site region 5383
Tssr152078 18 78030028 to 78030047 19 + TSS region transcription start site region 152078
Tssr152079 18 78030066 to 78030078 12 + TSS region transcription start site region 152079
Siglec15 18 78043614 to 78057395 13781 - protein coding gene sialic acid binding Ig-like lectin 15
Cpgi10284 18 78046878 to 78047947 1069 CpG island CpG island 10284
Cpgi10285 18 78048223 to 78049134 911 CpG island CpG island 10285
Tssr153962 18 78049447 to 78049457 10 - TSS region transcription start site region 153962
Tssr153963 18 78057360 to 78057371 11 - TSS region transcription start site region 153963
Tssr153964 18 78057396 to 78057407 11 - TSS region transcription start site region 153964
Tssr153965 18 78057435 to 78057446 11 - TSS region transcription start site region 153965
Tssr152080 18 78062827 to 78062835 8 + TSS region transcription start site region 152080
Slc14a1 18 78100091 to 78142119 42028 - protein coding gene solute carrier family 14 (urea transporter), member 1
Tssr153966 18 78101408 to 78101422 14 - TSS region transcription start site region 153966
Tssr153967 18 78101476 to 78101487 11 - TSS region transcription start site region 153967
Gm36338 18 78120590 to 78143458 22868 + lncRNA gene predicted gene, 36338
Tssr153968 18 78123324 to 78123338 14 - TSS region transcription start site region 153968
Tssr5384 18 78123369 to 78123372 3 - TSS region transcription start site region 5384
Tssr153969 18 78123380 to 78123390 10 - TSS region transcription start site region 153969
Tssr153970 18 78142079 to 78142090 11 - TSS region transcription start site region 153970
Tssr153971 18 78142137 to 78142154 17 - TSS region transcription start site region 153971
Tssr153972 18 78142167 to 78142176 9 - TSS region transcription start site region 153972
Cpgi10286 18 78142431 to 78142827 396 CpG island CpG island 10286
Slc14a2 18 78146940 to 78209094 62154 - protein coding gene solute carrier family 14 (urea transporter), member 2
Tssr153973 18 78179163 to 78179176 13 - TSS region transcription start site region 153973
Tssr153974 18 78205867 to 78205878 11 - TSS region transcription start site region 153974
Tssr153975 18 78205889 to 78205917 28 - TSS region transcription start site region 153975
Tssr153976 18 78205921 to 78205977 56 - TSS region transcription start site region 153976
Tssr153977 18 78206396 to 78206407 11 - TSS region transcription start site region 153977
Tssr153978 18 78206408 to 78206419 11 - TSS region transcription start site region 153978
Gm36418 18 78313144 to 78353491 40347 + lncRNA gene predicted gene, 36418
Gm6133 18 78349759 to 78350387 628 + pseudogene predicted gene 6133
Tssr152081 18 78476862 to 78476871 9 + TSS region transcription start site region 152081
Tssr152082 18 78476872 to 78476883 11 + TSS region transcription start site region 152082
Tssr152083 18 78476896 to 78476901 5 + TSS region transcription start site region 152083
4931439C15Rik 18 78477037 to 78480716 3679 + lncRNA gene RIKEN cDNA 4931439C15 gene
Tssr152084 18 78494889 to 78494891 2 + TSS region transcription start site region 152084
Gm26430 18 78533458 to 78533564 106 + snRNA gene predicted gene, 26430