Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:77690788-77860805

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
8030462N17Rik 18 77633281 to 77714010 80729 - protein coding gene RIKEN cDNA 8030462N17 gene
D18Dcr4 18 77704134 to 77704229 95 DNA segment DNA Segment, Chr 18, Derry C. Roopenian 4
Cpgi10278 18 77712899 to 77714720 1821 CpG island CpG island 10278
Tssr153955 18 77713916 to 77713973 57 - TSS region transcription start site region 153955
Tssr153956 18 77713978 to 77714002 24 - TSS region transcription start site region 153956
Tssr152039 18 77714191 to 77714214 23 + TSS region transcription start site region 152039
4930465K10Rik 18 77714210 to 77715449 1239 + unclassified non-coding RNA gene RIKEN cDNA 4930465K10 gene
Tssr153957 18 77714446 to 77714501 55 - TSS region transcription start site region 153957
A330094K24Rik 18 77729492 to 77732784 3292 - lincRNA gene RIKEN cDNA A330094K24 gene
Tssr153958 18 77732724 to 77732739 15 - TSS region transcription start site region 153958
Tssr152040 18 77733030 to 77733032 2 + TSS region transcription start site region 152040
Cpgi10279 18 77742591 to 77742978 387 CpG island CpG island 10279
5730552O08Rik 18 77743834 to 77746943 3109 unclassified gene RIKEN cDNA 5730552O08 gene
Haus1 18 77757567 to 77767780 10213 - protein coding gene HAUS augmin-like complex, subunit 1
Cpgi10280 18 77767430 to 77767937 507 CpG island CpG island 10280
Tssr153959 18 77767752 to 77767804 52 - TSS region transcription start site region 153959
Cpgi10281 18 77773643 to 77774694 1051 CpG island CpG island 10281
Atp5a1 18 77773768 to 77782869 9101 + protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
Tssr152041 18 77773984 to 77774006 22 + TSS region transcription start site region 152041
Tssr152042 18 77775788 to 77775805 17 + TSS region transcription start site region 152042
Tssr153960 18 77778534 to 77778572 38 - TSS region transcription start site region 153960
Tssr152043 18 77778579 to 77778611 32 + TSS region transcription start site region 152043
Tssr152044 18 77778755 to 77778797 42 + TSS region transcription start site region 152044
Tssr152045 18 77779846 to 77779897 51 + TSS region transcription start site region 152045
Tssr152046 18 77780070 to 77780120 50 + TSS region transcription start site region 152046
Tssr152047 18 77781839 to 77781860 21 + TSS region transcription start site region 152047
D18Mit47 18 77786076 to 77786175 99 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 47
Tssr152048 18 77789911 to 77789922 11 + TSS region transcription start site region 152048
Tssr152049 18 77790526 to 77790531 5 + TSS region transcription start site region 152049
F830208F22Rik 18 77793259 to 77796743 3484 - unclassified non-coding RNA gene RIKEN cDNA F830208F22 gene
Cpgi10282 18 77794201 to 77795345 1144 CpG island CpG island 10282
Tssr152050 18 77794361 to 77794382 21 + TSS region transcription start site region 152050
Tssr152051 18 77794532 to 77794543 11 + TSS region transcription start site region 152051
Pstpip2 18 77794545 to 77882007 87462 + protein coding gene proline-serine-threonine phosphatase-interacting protein 2
Tssr152052 18 77794557 to 77794610 53 + TSS region transcription start site region 152052
Tssr5382 18 77794698 to 77794719 21 + TSS region transcription start site region 5382
Tssr153961 18 77796214 to 77796226 12 - TSS region transcription start site region 153961
Tssr152053 18 77800188 to 77800196 8 + TSS region transcription start site region 152053
Gm23954 18 77806314 to 77806666 352 - unclassified non-coding RNA gene predicted gene, 23954
Tssr152054 18 77814353 to 77814366 13 + TSS region transcription start site region 152054
Tssr152055 18 77820355 to 77820381 26 + TSS region transcription start site region 152055
Tssr152056 18 77825379 to 77825401 22 + TSS region transcription start site region 152056
Tssr152057 18 77832971 to 77832976 5 + TSS region transcription start site region 152057
Tssr152058 18 77835179 to 77835190 11 + TSS region transcription start site region 152058
Tssr152059 18 77847489 to 77847498 9 + TSS region transcription start site region 152059