Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:76930702-77200705

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ier3ip1 18 76930027 to 76941614 11587 + protein coding gene immediate early response 3 interacting protein 1
Cpgi10263 18 76943853 to 76944534 681 CpG island CpG island 10263
Tssr153934 18 76944063 to 76944080 17 - TSS region transcription start site region 153934
Hdhd2 18 76944079 to 76972171 28092 + protein coding gene haloacid dehalogenase-like hydrolase domain containing 2
Tssr152006 18 76944094 to 76944168 74 + TSS region transcription start site region 152006
Tssr152007 18 76944392 to 76944444 52 + TSS region transcription start site region 152007
Tssr152008 18 76949034 to 76949041 7 + TSS region transcription start site region 152008
Tssr152009 18 76954895 to 76954906 11 + TSS region transcription start site region 152009
B430105A11Rik 18 76974829 to 76976161 1332 unclassified gene RIKEN cDNA B430105A11 gene
Katnal2 18 76977148 to 77047308 70160 - protein coding gene katanin p60 subunit A-like 2
Tssr152010 18 77006732 to 77006735 3 + TSS region transcription start site region 152010
Tssr153935 18 77016581 to 77016592 11 - TSS region transcription start site region 153935
Tssr152011 18 77038375 to 77038387 12 + TSS region transcription start site region 152011
Tssr152012 18 77038405 to 77038422 17 + TSS region transcription start site region 152012
Tssr152013 18 77038561 to 77038597 36 + TSS region transcription start site region 152013
Tssr152014 18 77038878 to 77038895 17 + TSS region transcription start site region 152014
Tssr153936 18 77040199 to 77040209 10 - TSS region transcription start site region 153936
Cpgi10264 18 77046883 to 77047515 632 CpG island CpG island 10264
Tssr153937 18 77047268 to 77047279 11 - TSS region transcription start site region 153937
Tssr153938 18 77047282 to 77047313 31 - TSS region transcription start site region 153938
Tssr152015 18 77057427 to 77057429 2 + TSS region transcription start site region 152015
Gm41782 18 77060492 to 77061333 841 - lncRNA gene predicted gene, 41782
4930520E11Rik 18 77064093 to 77065219 1126 - lncRNA gene RIKEN cDNA 4930520E11 gene
Cpgi10265 18 77064777 to 77066009 1232 CpG island CpG island 10265
Tssr153939 18 77065038 to 77065069 31 - TSS region transcription start site region 153939
Tssr153940 18 77065072 to 77065119 47 - TSS region transcription start site region 153940
Tssr152016 18 77065195 to 77065250 55 + TSS region transcription start site region 152016
Pias2 18 77065208 to 77155708 90500 + protein coding gene protein inhibitor of activated STAT 2
Tssr152017 18 77065477 to 77065545 68 + TSS region transcription start site region 152017
Tssr5378 18 77065558 to 77065572 14 - TSS region transcription start site region 5378
Tssr152018 18 77065584 to 77065587 3 + TSS region transcription start site region 152018
Tssr152019 18 77065637 to 77065685 48 + TSS region transcription start site region 152019
Tssr152020 18 77065702 to 77065705 3 + TSS region transcription start site region 152020
Tssr152021 18 77070736 to 77070744 8 + TSS region transcription start site region 152021
Tssr152022 18 77070749 to 77070765 16 + TSS region transcription start site region 152022
Tssr152023 18 77082182 to 77082188 6 + TSS region transcription start site region 152023
Tssr152024 18 77117615 to 77117624 9 + TSS region transcription start site region 152024
Tssr152025 18 77119809 to 77119827 18 + TSS region transcription start site region 152025
Tssr152026 18 77137320 to 77137334 14 + TSS region transcription start site region 152026
Tssr152027 18 77144310 to 77144321 11 + TSS region transcription start site region 152027
Tssr152028 18 77144998 to 77145010 12 + TSS region transcription start site region 152028
A730094L24Rik 18 77161791 to 77165258 3467 unclassified gene RIKEN cDNA A730094L24 gene
Tssr5379 18 77177073 to 77177098 25 + TSS region transcription start site region 5379
Gm7276 18 77185006 to 77186257 1251 - protein coding gene predicted gene 7276
Cpgi10266 18 77185212 to 77186448 1236 CpG island CpG island 10266
Tssr5380 18 77185626 to 77185639 13 + TSS region transcription start site region 5380
Tssr152029 18 77185815 to 77185879 64 + TSS region transcription start site region 152029
St8sia5 18 77185853 to 77255450 69597 + protein coding gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Tssr152030 18 77186040 to 77186048 8 + TSS region transcription start site region 152030
Tssr152031 18 77186059 to 77186078 19 + TSS region transcription start site region 152031
Tssr152032 18 77186087 to 77186117 30 + TSS region transcription start site region 152032
Tssr152033 18 77194769 to 77194773 4 + TSS region transcription start site region 152033
Tssr152034 18 77196010 to 77196019 9 + TSS region transcription start site region 152034
Tssr152035 18 77196178 to 77196206 28 + TSS region transcription start site region 152035
Cpgi10267 18 77198107 to 77198549 442 CpG island CpG island 10267