Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:76412702-77042797

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgis1 18 53157950 to 76826598 23668648 QTL proteoglycan induced spondylitis 1
Par2 18 70229262 to 76619461 6390199 QTL pulmonary adenoma resistance 2
Gm41779 18 76476827 to 76478631 1804 + lncRNA gene predicted gene, 41779
Cpgi10253 18 76543854 to 76544330 476 CpG island CpG island 10253
Gm31875 18 76553680 to 76555240 1560 - lncRNA gene predicted gene, 31875
Tssr153932 18 76555222 to 76555231 9 - TSS region transcription start site region 153932
Tssr151999 18 76595740 to 76595744 4 + TSS region transcription start site region 151999
Gm31933 18 76613896 to 76633066 19170 - lncRNA gene predicted gene, 31933
D18Mit162 18 76619361 to 76619461 100 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 162
Tssr153933 18 76632865 to 76632875 10 - TSS region transcription start site region 153933
Gm7273 18 76636806 to 76637348 542 + pseudogene predicted gene 7273
Cpgi10254 18 76653365 to 76653523 158 CpG island CpG island 10254
D18Dcr1 18 76727702 to 76727797 95 DNA segment DNA Segment, Chr 18, Derry C. Roopenian 1
D18Mit48 18 76808128 to 76808295 167 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 48
D18Mit80 18 76826489 to 76826598 109 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 80
Pgia11 18 76826489 to 76826598 109 QTL proteoglycan induced arthritis 11
Cpgi10255 18 76844211 to 76844673 462 CpG island CpG island 10255
Cpgi10256 18 76846506 to 76847588 1082 CpG island CpG island 10256
D18Mit7 18 76847626 to 76847720 94 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 7
Sluc28 18 76847626 to 76847720 94 QTL susceptibility to lung cancer 28
Cpgi10257 18 76853077 to 76853432 355 CpG island CpG island 10257
Cpgi10258 18 76855812 to 76856471 659 CpG island CpG island 10258
Tssr152000 18 76856133 to 76856148 15 + TSS region transcription start site region 152000
Tssr152001 18 76856155 to 76856166 11 + TSS region transcription start site region 152001
Tssr152002 18 76856311 to 76856327 16 + TSS region transcription start site region 152002
Skor2 18 76856405 to 76900342 43937 + protein coding gene SKI family transcriptional corepressor 2
Cpgi10259 18 76856742 to 76857083 341 CpG island CpG island 10259
Cpgi10260 18 76858491 to 76861079 2588 CpG island CpG island 10260
Tssr152003 18 76860499 to 76860516 17 + TSS region transcription start site region 152003
Gm32058 18 76922903 to 76929938 7035 - lncRNA gene predicted gene, 32058
Cpgi10261 18 76925531 to 76926026 495 CpG island CpG island 10261
Cpgi10262 18 76929828 to 76930382 554 CpG island CpG island 10262
Tssr152004 18 76930021 to 76930101 80 + TSS region transcription start site region 152004
Ier3ip1 18 76930027 to 76941614 11587 + protein coding gene immediate early response 3 interacting protein 1
Tssr152005 18 76930482 to 76930484 2 + TSS region transcription start site region 152005
Cpgi10263 18 76943853 to 76944534 681 CpG island CpG island 10263
Tssr153934 18 76944063 to 76944080 17 - TSS region transcription start site region 153934
Hdhd2 18 76944079 to 76972171 28092 + protein coding gene haloacid dehalogenase-like hydrolase domain containing 2
Tssr152006 18 76944094 to 76944168 74 + TSS region transcription start site region 152006
Tssr152007 18 76944392 to 76944444 52 + TSS region transcription start site region 152007
Tssr152008 18 76949034 to 76949041 7 + TSS region transcription start site region 152008
Tssr152009 18 76954895 to 76954906 11 + TSS region transcription start site region 152009
B430105A11Rik 18 76974829 to 76976161 1332 unclassified gene RIKEN cDNA B430105A11 gene
Katnal2 18 76977148 to 77047308 70160 - protein coding gene katanin p60 subunit A-like 2
Tssr152010 18 77006732 to 77006735 3 + TSS region transcription start site region 152010
Tssr153935 18 77016581 to 77016592 11 - TSS region transcription start site region 153935
Tssr152011 18 77038375 to 77038387 12 + TSS region transcription start site region 152011
Tssr152012 18 77038405 to 77038422 17 + TSS region transcription start site region 152012
Tssr152013 18 77038561 to 77038597 36 + TSS region transcription start site region 152013
Tssr152014 18 77038878 to 77038895 17 + TSS region transcription start site region 152014
Tssr153936 18 77040199 to 77040209 10 - TSS region transcription start site region 153936