Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:75475178-76493561

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ltpr8 18 63741832 to 76047170 12305338 QTL Leishmania tropica response 8
Ctif 18 75431224 to 75697696 266472 - protein coding gene CBP80/20-dependent translation initiation factor
Tssr151976 18 75488405 to 75488454 49 + TSS region transcription start site region 151976
Cpgi10240 18 75502798 to 75503139 341 CpG island CpG island 10240
Gm10532 18 75514645 to 75522806 8161 + lincRNA gene predicted gene 10532
Tssr153920 18 75562194 to 75562202 8 - TSS region transcription start site region 153920
Tssr151977 18 75562758 to 75562768 10 + TSS region transcription start site region 151977
D18Mit154 18 75598944 to 75599091 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 154
Tssr153921 18 75666137 to 75666157 20 - TSS region transcription start site region 153921
Tssr153922 18 75666185 to 75666216 31 - TSS region transcription start site region 153922
Cpgi10241 18 75695317 to 75695692 375 CpG island CpG island 10241
Cpgi10242 18 75695976 to 75698187 2211 CpG island CpG island 10242
Tssr153923 18 75697427 to 75697453 26 - TSS region transcription start site region 153923
Tssr153924 18 75697506 to 75697522 16 - TSS region transcription start site region 153924
Tssr153925 18 75697530 to 75697583 53 - TSS region transcription start site region 153925
Tssr153926 18 75697612 to 75697626 14 - TSS region transcription start site region 153926
Tssr153927 18 75697633 to 75697638 5 - TSS region transcription start site region 153927
Tssr153928 18 75697639 to 75697697 58 - TSS region transcription start site region 153928
Tssr151978 18 75767064 to 75767072 8 + TSS region transcription start site region 151978
Gm20570 18 75767068 to 75767539 471 + pseudogene predicted gene, 20570
Tssr5375 18 75767161 to 75767169 8 + TSS region transcription start site region 5375
1700034B16Rik 18 75781031 to 75782301 1270 + lincRNA gene RIKEN cDNA 1700034B16 gene
Tssr5376 18 75791513 to 75791515 2 + TSS region transcription start site region 5376
D18Mit79 18 75809914 to 75810023 109 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 79
Gm33703 18 75816691 to 75819926 3235 - lncRNA gene predicted gene, 33703
Cpgi10243 18 75819182 to 75821473 2291 CpG island CpG island 10243
Tssr151979 18 75820174 to 75820210 36 + TSS region transcription start site region 151979
Zbtb7c 18 75820178 to 76148561 328383 + protein coding gene zinc finger and BTB domain containing 7C
Tssr151980 18 75820212 to 75820236 24 + TSS region transcription start site region 151980
D18Mit210 18 75843369 to 75843487 118 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 210
Tssr151981 18 75923651 to 75923658 7 + TSS region transcription start site region 151981
Tssr5377 18 75930397 to 75930401 4 + TSS region transcription start site region 5377
1700003O11Rik 18 76014210 to 76015676 1466 unclassified gene RIKEN cDNA 1700003O11 gene
Tssr153929 18 76015638 to 76015643 5 - TSS region transcription start site region 153929
Tssr153930 18 76015648 to 76015659 11 - TSS region transcription start site region 153930
Cpgi10244 18 76034746 to 76035352 606 CpG island CpG island 10244
Tssr151982 18 76035395 to 76035430 35 + TSS region transcription start site region 151982
Tssr153931 18 76044279 to 76044284 5 - TSS region transcription start site region 153931
Ltpr8c 18 76047021 to 76047170 149 QTL Leishmania tropica response 8c
Ltpr8a 18 76047021 to 76047170 149 QTL Leishmania tropica response 8a
D18Mit49 18 76047021 to 76047170 149 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 49
Lmr29 18 76047021 to 76047170 149 QTL leishmaniasis resistance 29
Cpgi10245 18 76059325 to 76059930 605 CpG island CpG island 10245
Tssr151983 18 76059464 to 76059501 37 + TSS region transcription start site region 151983
Tssr151984 18 76059507 to 76059522 15 + TSS region transcription start site region 151984
Cpgi10246 18 76060356 to 76060752 396 CpG island CpG island 10246
2900057B20Rik 18 76091557 to 76098471 6914 - lncRNA gene RIKEN cDNA 2900057B20 gene
Tssr151985 18 76111844 to 76111854 10 + TSS region transcription start site region 151985
Cpgi10247 18 76136852 to 76137290 438 CpG island CpG island 10247
Cpgi10248 18 76145606 to 76146569 963 CpG island CpG island 10248
Cpgi10249 18 76160822 to 76161432 610 CpG island CpG island 10249
Tssr151986 18 76165118 to 76165128 10 + TSS region transcription start site region 151986
Tssr151987 18 76165136 to 76165149 13 + TSS region transcription start site region 151987
Tssr151988 18 76165161 to 76165170 9 + TSS region transcription start site region 151988
Mir6358 18 76170552 to 76170652 100 + miRNA gene microRNA 6358
Cpgi10250 18 76200701 to 76200946 245 CpG island CpG island 10250
Gm9028 18 76223901 to 76226345 2444 - pseudogene predicted gene 9028
BC026513 18 76226702 to 76228857 2155 unclassified gene cDNA sequence BC026513
Gm41778 18 76234341 to 76236913 2572 - lncRNA gene predicted gene, 41778
Cpgi10251 18 76240837 to 76242638 1801 CpG island CpG island 10251
Tssr151989 18 76241303 to 76241314 11 + TSS region transcription start site region 151989
Tssr151990 18 76241332 to 76241362 30 + TSS region transcription start site region 151990
Tssr151991 18 76241420 to 76241464 44 + TSS region transcription start site region 151991
Smad2 18 76241580 to 76305731 64151 + protein coding gene SMAD family member 2
Tssr151992 18 76241660 to 76241741 81 + TSS region transcription start site region 151992
Tssr151993 18 76241892 to 76241959 67 + TSS region transcription start site region 151993
Tssr151994 18 76242135 to 76242160 25 + TSS region transcription start site region 151994
Tssr151995 18 76268217 to 76268222 5 + TSS region transcription start site region 151995
Tssr151996 18 76268438 to 76268455 17 + TSS region transcription start site region 151996
Tssr151997 18 76268464 to 76268479 15 + TSS region transcription start site region 151997
1110001M07Rik 18 76295970 to 76296929 959 unclassified gene RIKEN cDNA 1110001M07 gene
A230038B01Rik 18 76311889 to 76315254 3365 unclassified gene RIKEN cDNA A230038B01 gene
Tssr151998 18 76343055 to 76343062 7 + TSS region transcription start site region 151998
Cpgi10252 18 76378198 to 76379359 1161 CpG island CpG island 10252
Gm41779 18 76476827 to 76478631 1804 + lncRNA gene predicted gene, 41779