Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:75380317-76010692

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smad7 18 75367529 to 75395935 28406 + protein coding gene SMAD family member 7
D18Mit142 18 75388953 to 75389072 119 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 142
Tssr151974 18 75394549 to 75394553 4 + TSS region transcription start site region 151974
Gm41776 18 75395773 to 75398668 2895 - lncRNA gene predicted gene, 41776
Cpgi10236 18 75415668 to 75415826 158 CpG island CpG island 10236
Cpgi10237 18 75424561 to 75424798 237 CpG island CpG island 10237
Tssr151975 18 75424679 to 75424687 8 + TSS region transcription start site region 151975
Ctif 18 75431224 to 75697696 266472 - protein coding gene CBP80/20-dependent translation initiation factor
Cpgi10238 18 75435031 to 75435245 214 CpG island CpG island 10238
2900040J22Rik 18 75469475 to 75470782 1307 unclassified gene RIKEN cDNA 2900040J22 gene
Cpgi10239 18 75471768 to 75471989 221 CpG island CpG island 10239
Tssr151976 18 75488405 to 75488454 49 + TSS region transcription start site region 151976
Cpgi10240 18 75502798 to 75503139 341 CpG island CpG island 10240
Gm10532 18 75514645 to 75522806 8161 + lincRNA gene predicted gene 10532
Tssr153920 18 75562194 to 75562202 8 - TSS region transcription start site region 153920
Tssr151977 18 75562758 to 75562768 10 + TSS region transcription start site region 151977
D18Mit154 18 75598944 to 75599091 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 154
Tssr153921 18 75666137 to 75666157 20 - TSS region transcription start site region 153921
Tssr153922 18 75666185 to 75666216 31 - TSS region transcription start site region 153922
Cpgi10241 18 75695317 to 75695692 375 CpG island CpG island 10241
Cpgi10242 18 75695976 to 75698187 2211 CpG island CpG island 10242
Tssr153923 18 75697427 to 75697453 26 - TSS region transcription start site region 153923
Tssr153924 18 75697506 to 75697522 16 - TSS region transcription start site region 153924
Tssr153925 18 75697530 to 75697583 53 - TSS region transcription start site region 153925
Tssr153926 18 75697612 to 75697626 14 - TSS region transcription start site region 153926
Tssr153927 18 75697633 to 75697638 5 - TSS region transcription start site region 153927
Tssr153928 18 75697639 to 75697697 58 - TSS region transcription start site region 153928
Tssr151978 18 75767064 to 75767072 8 + TSS region transcription start site region 151978
Gm20570 18 75767068 to 75767539 471 + pseudogene predicted gene, 20570
Tssr5375 18 75767161 to 75767169 8 + TSS region transcription start site region 5375
1700034B16Rik 18 75781031 to 75782301 1270 + lincRNA gene RIKEN cDNA 1700034B16 gene
Tssr5376 18 75791513 to 75791515 2 + TSS region transcription start site region 5376
D18Mit79 18 75809914 to 75810023 109 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 79
Gm33703 18 75816691 to 75819926 3235 - lncRNA gene predicted gene, 33703
Cpgi10243 18 75819182 to 75821473 2291 CpG island CpG island 10243
Tssr151979 18 75820174 to 75820210 36 + TSS region transcription start site region 151979
Zbtb7c 18 75820178 to 76148561 328383 + protein coding gene zinc finger and BTB domain containing 7C
Tssr151980 18 75820212 to 75820236 24 + TSS region transcription start site region 151980
D18Mit210 18 75843369 to 75843487 118 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 210
Tssr151981 18 75923651 to 75923658 7 + TSS region transcription start site region 151981
Tssr5377 18 75930397 to 75930401 4 + TSS region transcription start site region 5377