Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:74998530-75739648

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10227 18 75000368 to 75001071 703 CpG island CpG island 10227
Tssr151945 18 75000448 to 75000460 12 + TSS region transcription start site region 151945
Tssr151946 18 75000469 to 75000487 18 + TSS region transcription start site region 151946
Rpl17 18 75000477 to 75003381 2904 + protein coding gene ribosomal protein L17
Tssr151947 18 75000489 to 75000499 10 + TSS region transcription start site region 151947
Tssr151948 18 75000515 to 75000559 44 + TSS region transcription start site region 151948
Snord58b 18 75001068 to 75001122 54 + snoRNA gene small nucleolar RNA, C/D box 58B
Gm23301 18 75001455 to 75001519 64 + snoRNA gene predicted gene, 23301
Gm26202 18 75001880 to 75001944 64 + snoRNA gene predicted gene, 26202
Tssr151949 18 75001881 to 75001883 2 + TSS region transcription start site region 151949
Cpgi10228 18 75005601 to 75006251 650 CpG island CpG island 10228
Tssr151950 18 75005839 to 75005945 106 + TSS region transcription start site region 151950
BC031181 18 75005900 to 75009933 4033 + protein coding gene cDNA sequence BC031181
Cpgi10229 18 75018538 to 75019565 1027 CpG island CpG island 10229
Tssr151951 18 75018691 to 75018700 9 + TSS region transcription start site region 151951
Tssr151952 18 75018709 to 75018816 107 + TSS region transcription start site region 151952
Dym 18 75018772 to 75286966 268194 + protein coding gene dymeclin
Tssr151953 18 75018923 to 75018934 11 + TSS region transcription start site region 151953
Gm27781 18 75023856 to 75023947 91 + rRNA gene predicted gene, 27781
Tssr151954 18 75043099 to 75043116 17 + TSS region transcription start site region 151954
Tssr151955 18 75047293 to 75047314 21 + TSS region transcription start site region 151955
Tssr151956 18 75056868 to 75056885 17 + TSS region transcription start site region 151956
D18Mit187 18 75090362 to 75090479 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 187
Tssr151957 18 75106192 to 75106196 4 + TSS region transcription start site region 151957
Gm6870 18 75169673 to 75175093 5420 - pseudogene predicted gene 6870
Gm8807 18 75182218 to 75182709 491 - pseudogene predicted gene 8807
Tssr151958 18 75183842 to 75183865 23 + TSS region transcription start site region 151958
Tssr151959 18 75183869 to 75183883 14 + TSS region transcription start site region 151959
Tssr151960 18 75183888 to 75183897 9 + TSS region transcription start site region 151960
Tssr153912 18 75187340 to 75187369 29 - TSS region transcription start site region 153912
Gm46624 18 75188018 to 75196724 8706 - lncRNA gene predicted gene, 46624
Tssr151961 18 75245851 to 75245855 4 + TSS region transcription start site region 151961
Tssr153913 18 75278776 to 75278797 21 - TSS region transcription start site region 153913
Tssr151962 18 75278923 to 75278961 38 + TSS region transcription start site region 151962
Cpgi10230 18 75279312 to 75279523 211 CpG island CpG island 10230
Tssr151963 18 75279471 to 75279475 4 + TSS region transcription start site region 151963
2010010A06Rik 18 75288660 to 75297329 8669 - lncRNA gene RIKEN cDNA 2010010A06 gene
Tssr153914 18 75297283 to 75297294 11 - TSS region transcription start site region 153914
Tssr153915 18 75297315 to 75297328 13 - TSS region transcription start site region 153915
Tssr151964 18 75297588 to 75297594 6 + TSS region transcription start site region 151964
Cpgi10231 18 75307429 to 75307887 458 CpG island CpG island 10231
Cpgi10232 18 75342200 to 75343522 1322 CpG island CpG island 10232
Tssr153916 18 75342613 to 75342625 12 - TSS region transcription start site region 153916
Tssr5373 18 75360181 to 75360187 6 - TSS region transcription start site region 5373
Gm20544 18 75365332 to 75367088 1756 - lncRNA gene predicted gene 20544
Cpgi10233 18 75366324 to 75368168 1844 CpG island CpG island 10233
Tssr151965 18 75366643 to 75366668 25 + TSS region transcription start site region 151965
Tssr153917 18 75367070 to 75367095 25 - TSS region transcription start site region 153917
Tssr151966 18 75367355 to 75367373 18 + TSS region transcription start site region 151966
Tssr151967 18 75367376 to 75367401 25 + TSS region transcription start site region 151967
Tssr5374 18 75367420 to 75367424 4 + TSS region transcription start site region 5374
Smad7 18 75367529 to 75395935 28406 + protein coding gene SMAD family member 7
Tssr151968 18 75367556 to 75367561 5 + TSS region transcription start site region 151968
Tssr151969 18 75368031 to 75368035 4 + TSS region transcription start site region 151969
Tssr151970 18 75368156 to 75368189 33 + TSS region transcription start site region 151970
Tssr151971 18 75368512 to 75368516 4 + TSS region transcription start site region 151971
Cpgi10234 18 75368530 to 75369648 1118 CpG island CpG island 10234
Cpgi10235 18 75370196 to 75370891 695 CpG island CpG island 10235
Tssr151972 18 75370526 to 75370539 13 + TSS region transcription start site region 151972
Tssr151973 18 75370572 to 75370581 9 + TSS region transcription start site region 151973
Tssr153918 18 75377543 to 75377548 5 - TSS region transcription start site region 153918
Tssr153919 18 75378251 to 75378256 5 - TSS region transcription start site region 153919
D18Mit142 18 75388953 to 75389072 119 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 142
Tssr151974 18 75394549 to 75394553 4 + TSS region transcription start site region 151974
Gm41776 18 75395773 to 75398668 2895 - lncRNA gene predicted gene, 41776
Cpgi10236 18 75415668 to 75415826 158 CpG island CpG island 10236
Cpgi10237 18 75424561 to 75424798 237 CpG island CpG island 10237
Tssr151975 18 75424679 to 75424687 8 + TSS region transcription start site region 151975
Ctif 18 75431224 to 75697696 266472 - protein coding gene CBP80/20-dependent translation initiation factor
Cpgi10238 18 75435031 to 75435245 214 CpG island CpG island 10238
2900040J22Rik 18 75469475 to 75470782 1307 unclassified gene RIKEN cDNA 2900040J22 gene
Cpgi10239 18 75471768 to 75471989 221 CpG island CpG island 10239
Tssr151976 18 75488405 to 75488454 49 + TSS region transcription start site region 151976
Cpgi10240 18 75502798 to 75503139 341 CpG island CpG island 10240
Gm10532 18 75514645 to 75522806 8161 + lincRNA gene predicted gene 10532
Tssr153920 18 75562194 to 75562202 8 - TSS region transcription start site region 153920
Tssr151977 18 75562758 to 75562768 10 + TSS region transcription start site region 151977
D18Mit154 18 75598944 to 75599091 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 154
Tssr153921 18 75666137 to 75666157 20 - TSS region transcription start site region 153921
Tssr153922 18 75666185 to 75666216 31 - TSS region transcription start site region 153922
Cpgi10241 18 75695317 to 75695692 375 CpG island CpG island 10241
Cpgi10242 18 75695976 to 75698187 2211 CpG island CpG island 10242
Tssr153923 18 75697427 to 75697453 26 - TSS region transcription start site region 153923
Tssr153924 18 75697506 to 75697522 16 - TSS region transcription start site region 153924
Tssr153925 18 75697530 to 75697583 53 - TSS region transcription start site region 153925
Tssr153926 18 75697612 to 75697626 14 - TSS region transcription start site region 153926
Tssr153927 18 75697633 to 75697638 5 - TSS region transcription start site region 153927
Tssr153928 18 75697639 to 75697697 58 - TSS region transcription start site region 153928