Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:74733923-75303934

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myo5b 18 74442380 to 74772698 330318 + protein coding gene myosin VB
Tssr151935 18 74740111 to 74740146 35 + TSS region transcription start site region 151935
Tssr151936 18 74765075 to 74765076 1 + TSS region transcription start site region 151936
Gm41774 18 74777890 to 74778998 1108 - lncRNA gene predicted gene, 41774
Scarna17 18 74778394 to 74778455 61 - snoRNA gene small Cajal body-specific RNA 17
Cpgi10223 18 74778482 to 74779625 1143 CpG island CpG island 10223
Gm23119 18 74778561 to 74778700 139 - snoRNA gene predicted gene, 23119
Tssr153908 18 74778740 to 74778816 76 - TSS region transcription start site region 153908
Tssr151937 18 74779178 to 74779189 11 + TSS region transcription start site region 151937
Tssr151938 18 74779190 to 74779199 9 + TSS region transcription start site region 151938
Tssr151939 18 74779203 to 74779224 21 + TSS region transcription start site region 151939
Acaa2 18 74779212 to 74806207 26995 + protein coding gene acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)
Tssr151940 18 74787083 to 74787100 17 + TSS region transcription start site region 151940
Tssr151941 18 74787104 to 74787123 19 + TSS region transcription start site region 151941
Tssr151942 18 74787136 to 74787148 12 + TSS region transcription start site region 151942
Tssr151943 18 74792415 to 74792428 13 + TSS region transcription start site region 151943
Tssr151944 18 74796992 to 74797040 48 + TSS region transcription start site region 151944
Cpgi10224 18 74823271 to 74823510 239 CpG island CpG island 10224
Mbmq1 18 74857210 to 74857334 124 QTL male body mass QTL 1
D18Mit153 18 74857210 to 74857334 124 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 153
Gm24559 18 74906314 to 74906434 120 - snoRNA gene predicted gene, 24559
Rpl37a-ps2 18 74910097 to 74910443 346 - pseudogene ribosomal protein L37a, pseudogene 2
Gm25594 18 74910152 to 74910233 81 - miRNA gene predicted gene, 25594
Gm18786 18 74936312 to 74937269 957 + pseudogene predicted gene, 18786
Lipg 18 74939322 to 74961263 21941 - protein coding gene lipase, endothelial
Tssr153909 18 74958019 to 74958026 7 - TSS region transcription start site region 153909
Cpgi10225 18 74960643 to 74962569 1926 CpG island CpG island 10225
Tssr153910 18 74961252 to 74961268 16 - TSS region transcription start site region 153910
9030625G05Rik 18 74972764 to 74981547 8783 - lncRNA gene RIKEN cDNA 9030625G05 gene
Tssr153911 18 74981538 to 74981554 16 - TSS region transcription start site region 153911
Cpgi10226 18 74991129 to 74991368 239 CpG island CpG island 10226
Cpgi10227 18 75000368 to 75001071 703 CpG island CpG island 10227
Tssr151945 18 75000448 to 75000460 12 + TSS region transcription start site region 151945
Tssr151946 18 75000469 to 75000487 18 + TSS region transcription start site region 151946
Rpl17 18 75000477 to 75003381 2904 + protein coding gene ribosomal protein L17
Tssr151947 18 75000489 to 75000499 10 + TSS region transcription start site region 151947
Tssr151948 18 75000515 to 75000559 44 + TSS region transcription start site region 151948
Snord58b 18 75001068 to 75001122 54 + snoRNA gene small nucleolar RNA, C/D box 58B
Gm23301 18 75001455 to 75001519 64 + snoRNA gene predicted gene, 23301
Gm26202 18 75001880 to 75001944 64 + snoRNA gene predicted gene, 26202
Tssr151949 18 75001881 to 75001883 2 + TSS region transcription start site region 151949
Cpgi10228 18 75005601 to 75006251 650 CpG island CpG island 10228
Tssr151950 18 75005839 to 75005945 106 + TSS region transcription start site region 151950
BC031181 18 75005900 to 75009933 4033 + protein coding gene cDNA sequence BC031181
Cpgi10229 18 75018538 to 75019565 1027 CpG island CpG island 10229
Tssr151951 18 75018691 to 75018700 9 + TSS region transcription start site region 151951
Tssr151952 18 75018709 to 75018816 107 + TSS region transcription start site region 151952
Dym 18 75018772 to 75286966 268194 + protein coding gene dymeclin
Tssr151953 18 75018923 to 75018934 11 + TSS region transcription start site region 151953
Gm27781 18 75023856 to 75023947 91 + rRNA gene predicted gene, 27781
Tssr151954 18 75043099 to 75043116 17 + TSS region transcription start site region 151954
Tssr151955 18 75047293 to 75047314 21 + TSS region transcription start site region 151955
Tssr151956 18 75056868 to 75056885 17 + TSS region transcription start site region 151956
D18Mit187 18 75090362 to 75090479 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 187
Tssr151957 18 75106192 to 75106196 4 + TSS region transcription start site region 151957
Gm6870 18 75169673 to 75175093 5420 - pseudogene predicted gene 6870
Gm8807 18 75182218 to 75182709 491 - pseudogene predicted gene 8807
Tssr151958 18 75183842 to 75183865 23 + TSS region transcription start site region 151958
Tssr151959 18 75183869 to 75183883 14 + TSS region transcription start site region 151959
Tssr151960 18 75183888 to 75183897 9 + TSS region transcription start site region 151960
Tssr153912 18 75187340 to 75187369 29 - TSS region transcription start site region 153912
Gm46624 18 75188018 to 75196724 8706 - lncRNA gene predicted gene, 46624
Tssr151961 18 75245851 to 75245855 4 + TSS region transcription start site region 151961
Tssr153913 18 75278776 to 75278797 21 - TSS region transcription start site region 153913
Tssr151962 18 75278923 to 75278961 38 + TSS region transcription start site region 151962
Cpgi10230 18 75279312 to 75279523 211 CpG island CpG island 10230
Tssr151963 18 75279471 to 75279475 4 + TSS region transcription start site region 151963
2010010A06Rik 18 75288660 to 75297329 8669 - lncRNA gene RIKEN cDNA 2010010A06 gene
Tssr153914 18 75297283 to 75297294 11 - TSS region transcription start site region 153914
Tssr153915 18 75297315 to 75297328 13 - TSS region transcription start site region 153915
Tssr151964 18 75297588 to 75297594 6 + TSS region transcription start site region 151964