Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:73978692-75488703

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186 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Idd21.2 18 61139376 to 74429343 13289967 QTL insulin dependent diabetes susceptibility 21.2
Mapk4 18 73928486 to 74065120 136634 - protein coding gene mitogen-activated protein kinase 4
D730045A05Rik 18 74017907 to 74020088 2181 + lincRNA gene RIKEN cDNA D730045A05 gene
Cpgi10212 18 74063585 to 74065564 1979 CpG island CpG island 10212
Tssr153896 18 74064899 to 74064943 44 - TSS region transcription start site region 153896
Tssr153897 18 74064945 to 74064963 18 - TSS region transcription start site region 153897
Gm9925 18 74065102 to 74065584 482 + unclassified gene predicted gene 9925
Tssr153898 18 74065350 to 74065360 10 - TSS region transcription start site region 153898
Tssr153899 18 74065657 to 74065681 24 - TSS region transcription start site region 153899
Gm32801 18 74089439 to 74103187 13748 + lncRNA gene predicted gene, 32801
Ska1 18 74195299 to 74207818 12519 - protein coding gene spindle and kinetochore associated complex subunit 1
Cpgi10213 18 74207150 to 74207894 744 CpG island CpG island 10213
Tssr153900 18 74207702 to 74207721 19 - TSS region transcription start site region 153900
Tssr153901 18 74207736 to 74207759 23 - TSS region transcription start site region 153901
Tssr153902 18 74207771 to 74207790 19 - TSS region transcription start site region 153902
Tssr153903 18 74207814 to 74207823 9 - TSS region transcription start site region 153903
Tssr153904 18 74215696 to 74215699 3 - TSS region transcription start site region 153904
Cpgi10214 18 74215793 to 74216812 1019 CpG island CpG island 10214
Tssr153905 18 74215939 to 74215946 7 - TSS region transcription start site region 153905
Tssr151897 18 74216100 to 74216109 9 + TSS region transcription start site region 151897
Tssr151898 18 74216118 to 74216145 27 + TSS region transcription start site region 151898
Cxxc1 18 74216131 to 74221491 5360 + protein coding gene CXXC finger 1 (PHD domain)
Tssr151899 18 74216167 to 74216173 6 + TSS region transcription start site region 151899
Tssr151900 18 74216197 to 74216237 40 + TSS region transcription start site region 151900
Tssr151901 18 74216346 to 74216407 61 + TSS region transcription start site region 151901
Cpgi10215 18 74217112 to 74217305 193 CpG island CpG island 10215
Tssr151902 18 74220505 to 74220535 30 + TSS region transcription start site region 151902
Tssr151903 18 74230184 to 74230189 5 + TSS region transcription start site region 151903
Tssr151904 18 74240857 to 74240867 10 + TSS region transcription start site region 151904
Gm5690 18 74240858 to 74241552 694 + pseudogene predicted gene 5690
Mbd1 18 74267605 to 74282732 15127 + protein coding gene methyl-CpG binding domain protein 1
Cpgi10216 18 74267827 to 74268622 795 CpG island CpG island 10216
Tssr151905 18 74268179 to 74268208 29 + TSS region transcription start site region 151905
Tssr151906 18 74268212 to 74268227 15 + TSS region transcription start site region 151906
Tssr151907 18 74268231 to 74268246 15 + TSS region transcription start site region 151907
Tssr151908 18 74268251 to 74268337 86 + TSS region transcription start site region 151908
Cpgi10217 18 74275897 to 74276075 178 CpG island CpG island 10217
Tssr151909 18 74283098 to 74283131 33 + TSS region transcription start site region 151909
Cfap53 18 74283100 to 74359984 76884 + protein coding gene cilia and flagella associated protein 53
Tssr151910 18 74283137 to 74283153 16 + TSS region transcription start site region 151910
Tssr151911 18 74283154 to 74283173 19 + TSS region transcription start site region 151911
Tssr151912 18 74288379 to 74288394 15 + TSS region transcription start site region 151912
Cpgi10218 18 74294963 to 74295213 250 CpG island CpG island 10218
V125Dq14 18 74300000 to 74300000 0 QTL vitamin D active form serum level QTL 14
Gm14328 18 74303524 to 74303931 407 - pseudogene predicted gene 14328
Tssr153906 18 74303982 to 74303987 5 - TSS region transcription start site region 153906
Gm41773 18 74346486 to 74348123 1637 - lncRNA gene predicted gene, 41773
Tssr153907 18 74347601 to 74347630 29 - TSS region transcription start site region 153907
Gm8986 18 74400608 to 74401050 442 + pseudogene predicted gene 8986
Gm8987 18 74420823 to 74421528 705 - pseudogene predicted gene 8987
Idd21.1 18 74429267 to 84126470 9697203 QTL insulin dependent diabetes susceptibility 21.1
Lbw6 18 74429267 to 74429343 76 QTL lupus NZB x NZW 6
D18Mit8 18 74429267 to 74429343 76 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 8
Cpgi10219 18 74440861 to 74441016 155 CpG island CpG island 10219
Cpgi10220 18 74442005 to 74443313 1308 CpG island CpG island 10220
Tssr151913 18 74442352 to 74442364 12 + TSS region transcription start site region 151913
Myo5b 18 74442380 to 74772698 330318 + protein coding gene myosin VB
Tssr151914 18 74442398 to 74442409 11 + TSS region transcription start site region 151914
Tssr151915 18 74442424 to 74442436 12 + TSS region transcription start site region 151915
Tssr151916 18 74442463 to 74442479 16 + TSS region transcription start site region 151916
Tssr151917 18 74442500 to 74442532 32 + TSS region transcription start site region 151917
Tssr151918 18 74442551 to 74442631 80 + TSS region transcription start site region 151918
Tssr151919 18 74442654 to 74442664 10 + TSS region transcription start site region 151919
Cpgi10221 18 74443684 to 74444304 620 CpG island CpG island 10221
Cpgi10222 18 74444546 to 74444784 238 CpG island CpG island 10222
Tssr151920 18 74489260 to 74489264 4 + TSS region transcription start site region 151920
Tssr151921 18 74517194 to 74517200 6 + TSS region transcription start site region 151921
1700120E14Rik 18 74525140 to 74531124 5984 - antisense lncRNA gene RIKEN cDNA 1700120E14 gene
Tssr151922 18 74531233 to 74531250 17 + TSS region transcription start site region 151922
Tssr5372 18 74531255 to 74531260 5 + TSS region transcription start site region 5372
Gm33090 18 74622300 to 74625555 3255 - lncRNA gene predicted gene, 33090
Tssr151923 18 74625074 to 74625084 10 + TSS region transcription start site region 151923
Tssr151924 18 74625499 to 74625512 13 + TSS region transcription start site region 151924
Tssr151925 18 74625526 to 74625560 34 + TSS region transcription start site region 151925
Tssr151926 18 74625561 to 74625571 10 + TSS region transcription start site region 151926
Tssr151927 18 74708008 to 74708043 35 + TSS region transcription start site region 151927
Tssr151928 18 74714737 to 74714752 15 + TSS region transcription start site region 151928
Tssr151929 18 74714765 to 74714774 9 + TSS region transcription start site region 151929
Tssr151930 18 74714783 to 74714796 13 + TSS region transcription start site region 151930
Tssr151931 18 74733692 to 74733703 11 + TSS region transcription start site region 151931
Tssr151932 18 74733711 to 74733720 9 + TSS region transcription start site region 151932
Tssr151933 18 74733735 to 74733824 89 + TSS region transcription start site region 151933
Tssr151934 18 74733834 to 74733854 20 + TSS region transcription start site region 151934
Tssr151935 18 74740111 to 74740146 35 + TSS region transcription start site region 151935
Tssr151936 18 74765075 to 74765076 1 + TSS region transcription start site region 151936
Gm41774 18 74777890 to 74778998 1108 - lncRNA gene predicted gene, 41774
Scarna17 18 74778394 to 74778455 61 - snoRNA gene small Cajal body-specific RNA 17
Cpgi10223 18 74778482 to 74779625 1143 CpG island CpG island 10223
Gm23119 18 74778561 to 74778700 139 - snoRNA gene predicted gene, 23119
Tssr153908 18 74778740 to 74778816 76 - TSS region transcription start site region 153908
Tssr151937 18 74779178 to 74779189 11 + TSS region transcription start site region 151937
Tssr151938 18 74779190 to 74779199 9 + TSS region transcription start site region 151938
Tssr151939 18 74779203 to 74779224 21 + TSS region transcription start site region 151939
Acaa2 18 74779212 to 74806207 26995 + protein coding gene acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)
Tssr151940 18 74787083 to 74787100 17 + TSS region transcription start site region 151940
Tssr151941 18 74787104 to 74787123 19 + TSS region transcription start site region 151941
Tssr151942 18 74787136 to 74787148 12 + TSS region transcription start site region 151942
Tssr151943 18 74792415 to 74792428 13 + TSS region transcription start site region 151943
Tssr151944 18 74796992 to 74797040 48 + TSS region transcription start site region 151944
Cpgi10224 18 74823271 to 74823510 239 CpG island CpG island 10224
D18Mit153 18 74857210 to 74857334 124 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 153
Mbmq1 18 74857210 to 74857334 124 QTL male body mass QTL 1
Gm24559 18 74906314 to 74906434 120 - snoRNA gene predicted gene, 24559
Rpl37a-ps2 18 74910097 to 74910443 346 - pseudogene ribosomal protein L37a, pseudogene 2
Gm25594 18 74910152 to 74910233 81 - miRNA gene predicted gene, 25594
Gm18786 18 74936312 to 74937269 957 + pseudogene predicted gene, 18786
Lipg 18 74939322 to 74961263 21941 - protein coding gene lipase, endothelial
Tssr153909 18 74958019 to 74958026 7 - TSS region transcription start site region 153909
Cpgi10225 18 74960643 to 74962569 1926 CpG island CpG island 10225
Tssr153910 18 74961252 to 74961268 16 - TSS region transcription start site region 153910
9030625G05Rik 18 74972764 to 74981547 8783 - lncRNA gene RIKEN cDNA 9030625G05 gene
Tssr153911 18 74981538 to 74981554 16 - TSS region transcription start site region 153911
Cpgi10226 18 74991129 to 74991368 239 CpG island CpG island 10226
Cpgi10227 18 75000368 to 75001071 703 CpG island CpG island 10227
Tssr151945 18 75000448 to 75000460 12 + TSS region transcription start site region 151945
Tssr151946 18 75000469 to 75000487 18 + TSS region transcription start site region 151946
Rpl17 18 75000477 to 75003381 2904 + protein coding gene ribosomal protein L17
Tssr151947 18 75000489 to 75000499 10 + TSS region transcription start site region 151947
Tssr151948 18 75000515 to 75000559 44 + TSS region transcription start site region 151948
Snord58b 18 75001068 to 75001122 54 + snoRNA gene small nucleolar RNA, C/D box 58B
Gm23301 18 75001455 to 75001519 64 + snoRNA gene predicted gene, 23301
Gm26202 18 75001880 to 75001944 64 + snoRNA gene predicted gene, 26202
Tssr151949 18 75001881 to 75001883 2 + TSS region transcription start site region 151949
Cpgi10228 18 75005601 to 75006251 650 CpG island CpG island 10228
Tssr151950 18 75005839 to 75005945 106 + TSS region transcription start site region 151950
BC031181 18 75005900 to 75009933 4033 + protein coding gene cDNA sequence BC031181
Cpgi10229 18 75018538 to 75019565 1027 CpG island CpG island 10229
Tssr151951 18 75018691 to 75018700 9 + TSS region transcription start site region 151951
Tssr151952 18 75018709 to 75018816 107 + TSS region transcription start site region 151952
Dym 18 75018772 to 75286966 268194 + protein coding gene dymeclin
Tssr151953 18 75018923 to 75018934 11 + TSS region transcription start site region 151953
Gm27781 18 75023856 to 75023947 91 + rRNA gene predicted gene, 27781
Tssr151954 18 75043099 to 75043116 17 + TSS region transcription start site region 151954
Tssr151955 18 75047293 to 75047314 21 + TSS region transcription start site region 151955
Tssr151956 18 75056868 to 75056885 17 + TSS region transcription start site region 151956
D18Mit187 18 75090362 to 75090479 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 187
Tssr151957 18 75106192 to 75106196 4 + TSS region transcription start site region 151957
Gm6870 18 75169673 to 75175093 5420 - pseudogene predicted gene 6870
Gm8807 18 75182218 to 75182709 491 - pseudogene predicted gene 8807
Tssr151958 18 75183842 to 75183865 23 + TSS region transcription start site region 151958
Tssr151959 18 75183869 to 75183883 14 + TSS region transcription start site region 151959
Tssr151960 18 75183888 to 75183897 9 + TSS region transcription start site region 151960
Tssr153912 18 75187340 to 75187369 29 - TSS region transcription start site region 153912
Gm46624 18 75188018 to 75196724 8706 - lncRNA gene predicted gene, 46624
Tssr151961 18 75245851 to 75245855 4 + TSS region transcription start site region 151961
Tssr153913 18 75278776 to 75278797 21 - TSS region transcription start site region 153913
Tssr151962 18 75278923 to 75278961 38 + TSS region transcription start site region 151962
Cpgi10230 18 75279312 to 75279523 211 CpG island CpG island 10230
Tssr151963 18 75279471 to 75279475 4 + TSS region transcription start site region 151963
2010010A06Rik 18 75288660 to 75297329 8669 - lncRNA gene RIKEN cDNA 2010010A06 gene
Tssr153914 18 75297283 to 75297294 11 - TSS region transcription start site region 153914
Tssr153915 18 75297315 to 75297328 13 - TSS region transcription start site region 153915
Tssr151964 18 75297588 to 75297594 6 + TSS region transcription start site region 151964
Cpgi10231 18 75307429 to 75307887 458 CpG island CpG island 10231
Cpgi10232 18 75342200 to 75343522 1322 CpG island CpG island 10232
Tssr153916 18 75342613 to 75342625 12 - TSS region transcription start site region 153916
Tssr5373 18 75360181 to 75360187 6 - TSS region transcription start site region 5373
Gm20544 18 75365332 to 75367088 1756 - lncRNA gene predicted gene 20544
Cpgi10233 18 75366324 to 75368168 1844 CpG island CpG island 10233
Tssr151965 18 75366643 to 75366668 25 + TSS region transcription start site region 151965
Tssr153917 18 75367070 to 75367095 25 - TSS region transcription start site region 153917
Tssr151966 18 75367355 to 75367373 18 + TSS region transcription start site region 151966
Tssr151967 18 75367376 to 75367401 25 + TSS region transcription start site region 151967
Tssr5374 18 75367420 to 75367424 4 + TSS region transcription start site region 5374
Smad7 18 75367529 to 75395935 28406 + protein coding gene SMAD family member 7
Tssr151968 18 75367556 to 75367561 5 + TSS region transcription start site region 151968
Tssr151969 18 75368031 to 75368035 4 + TSS region transcription start site region 151969
Tssr151970 18 75368156 to 75368189 33 + TSS region transcription start site region 151970
Tssr151971 18 75368512 to 75368516 4 + TSS region transcription start site region 151971
Cpgi10234 18 75368530 to 75369648 1118 CpG island CpG island 10234
Cpgi10235 18 75370196 to 75370891 695 CpG island CpG island 10235
Tssr151972 18 75370526 to 75370539 13 + TSS region transcription start site region 151972
Tssr151973 18 75370572 to 75370581 9 + TSS region transcription start site region 151973
Tssr153918 18 75377543 to 75377548 5 - TSS region transcription start site region 153918
Tssr153919 18 75378251 to 75378256 5 - TSS region transcription start site region 153919
D18Mit142 18 75388953 to 75389072 119 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 142
Tssr151974 18 75394549 to 75394553 4 + TSS region transcription start site region 151974
Gm41776 18 75395773 to 75398668 2895 - lncRNA gene predicted gene, 41776
Cpgi10236 18 75415668 to 75415826 158 CpG island CpG island 10236
Cpgi10237 18 75424561 to 75424798 237 CpG island CpG island 10237
Tssr151975 18 75424679 to 75424687 8 + TSS region transcription start site region 151975
Ctif 18 75431224 to 75697696 266472 - protein coding gene CBP80/20-dependent translation initiation factor
Cpgi10238 18 75435031 to 75435245 214 CpG island CpG island 10238
2900040J22Rik 18 75469475 to 75470782 1307 unclassified gene RIKEN cDNA 2900040J22 gene
Cpgi10239 18 75471768 to 75471989 221 CpG island CpG island 10239
Tssr151976 18 75488405 to 75488454 49 + TSS region transcription start site region 151976