Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:73820939-74610946

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Idd21.2 18 61139376 to 74429343 13289967 QTL insulin dependent diabetes susceptibility 21.2
Tssr153890 18 73836843 to 73836847 4 - TSS region transcription start site region 153890
Gm32661 18 73849882 to 73884056 34174 - lncRNA gene predicted gene, 32661
Tssr151887 18 73859366 to 73859399 33 + TSS region transcription start site region 151887
Mro 18 73859385 to 73881333 21948 + protein coding gene maestro
Tssr151888 18 73863194 to 73863215 21 + TSS region transcription start site region 151888
Cpgi10209 18 73863526 to 73863891 365 CpG island CpG island 10209
Tssr151889 18 73863615 to 73863648 33 + TSS region transcription start site region 151889
Tssr151890 18 73863692 to 73863713 21 + TSS region transcription start site region 151890
Tssr151891 18 73869978 to 73869990 12 + TSS region transcription start site region 151891
Tssr151892 18 73878234 to 73878242 8 + TSS region transcription start site region 151892
Tssr151893 18 73878541 to 73878543 2 + TSS region transcription start site region 151893
Mapk4 18 73928486 to 74065120 136634 - protein coding gene mitogen-activated protein kinase 4
Tssr153891 18 73928681 to 73928695 14 - TSS region transcription start site region 153891
Cpgi10210 18 73930273 to 73931177 904 CpG island CpG island 10210
Tssr151894 18 73948314 to 73948325 11 + TSS region transcription start site region 151894
Tssr153892 18 73948877 to 73948883 6 - TSS region transcription start site region 153892
Tssr151895 18 73949348 to 73949356 8 + TSS region transcription start site region 151895
Tssr151896 18 73963598 to 73963603 5 + TSS region transcription start site region 151896
Cpgi10211 18 73970030 to 73970407 377 CpG island CpG island 10211
Tssr153893 18 73970847 to 73970865 18 - TSS region transcription start site region 153893
Tssr153894 18 73971298 to 73971321 23 - TSS region transcription start site region 153894
Tssr153895 18 73971447 to 73971487 40 - TSS region transcription start site region 153895
D730045A05Rik 18 74017907 to 74020088 2181 + lincRNA gene RIKEN cDNA D730045A05 gene
Cpgi10212 18 74063585 to 74065564 1979 CpG island CpG island 10212
Tssr153896 18 74064899 to 74064943 44 - TSS region transcription start site region 153896
Tssr153897 18 74064945 to 74064963 18 - TSS region transcription start site region 153897
Gm9925 18 74065102 to 74065584 482 + unclassified gene predicted gene 9925
Tssr153898 18 74065350 to 74065360 10 - TSS region transcription start site region 153898
Tssr153899 18 74065657 to 74065681 24 - TSS region transcription start site region 153899
Gm32801 18 74089439 to 74103187 13748 + lncRNA gene predicted gene, 32801
Ska1 18 74195299 to 74207818 12519 - protein coding gene spindle and kinetochore associated complex subunit 1
Cpgi10213 18 74207150 to 74207894 744 CpG island CpG island 10213
Tssr153900 18 74207702 to 74207721 19 - TSS region transcription start site region 153900
Tssr153901 18 74207736 to 74207759 23 - TSS region transcription start site region 153901
Tssr153902 18 74207771 to 74207790 19 - TSS region transcription start site region 153902
Tssr153903 18 74207814 to 74207823 9 - TSS region transcription start site region 153903
Tssr153904 18 74215696 to 74215699 3 - TSS region transcription start site region 153904
Cpgi10214 18 74215793 to 74216812 1019 CpG island CpG island 10214
Tssr153905 18 74215939 to 74215946 7 - TSS region transcription start site region 153905
Tssr151897 18 74216100 to 74216109 9 + TSS region transcription start site region 151897
Tssr151898 18 74216118 to 74216145 27 + TSS region transcription start site region 151898
Cxxc1 18 74216131 to 74221491 5360 + protein coding gene CXXC finger 1 (PHD domain)
Tssr151899 18 74216167 to 74216173 6 + TSS region transcription start site region 151899
Tssr151900 18 74216197 to 74216237 40 + TSS region transcription start site region 151900
Tssr151901 18 74216346 to 74216407 61 + TSS region transcription start site region 151901
Cpgi10215 18 74217112 to 74217305 193 CpG island CpG island 10215
Tssr151902 18 74220505 to 74220535 30 + TSS region transcription start site region 151902
Tssr151903 18 74230184 to 74230189 5 + TSS region transcription start site region 151903
Tssr151904 18 74240857 to 74240867 10 + TSS region transcription start site region 151904
Gm5690 18 74240858 to 74241552 694 + pseudogene predicted gene 5690
Mbd1 18 74267605 to 74282732 15127 + protein coding gene methyl-CpG binding domain protein 1
Cpgi10216 18 74267827 to 74268622 795 CpG island CpG island 10216
Tssr151905 18 74268179 to 74268208 29 + TSS region transcription start site region 151905
Tssr151906 18 74268212 to 74268227 15 + TSS region transcription start site region 151906
Tssr151907 18 74268231 to 74268246 15 + TSS region transcription start site region 151907
Tssr151908 18 74268251 to 74268337 86 + TSS region transcription start site region 151908
Cpgi10217 18 74275897 to 74276075 178 CpG island CpG island 10217
Tssr151909 18 74283098 to 74283131 33 + TSS region transcription start site region 151909
Cfap53 18 74283100 to 74359984 76884 + protein coding gene cilia and flagella associated protein 53
Tssr151910 18 74283137 to 74283153 16 + TSS region transcription start site region 151910
Tssr151911 18 74283154 to 74283173 19 + TSS region transcription start site region 151911
Tssr151912 18 74288379 to 74288394 15 + TSS region transcription start site region 151912
Cpgi10218 18 74294963 to 74295213 250 CpG island CpG island 10218
V125Dq14 18 74300000 to 74300000 0 QTL vitamin D active form serum level QTL 14
Gm14328 18 74303524 to 74303931 407 - pseudogene predicted gene 14328
Tssr153906 18 74303982 to 74303987 5 - TSS region transcription start site region 153906
Gm41773 18 74346486 to 74348123 1637 - lncRNA gene predicted gene, 41773
Tssr153907 18 74347601 to 74347630 29 - TSS region transcription start site region 153907
Gm8986 18 74400608 to 74401050 442 + pseudogene predicted gene 8986
Gm8987 18 74420823 to 74421528 705 - pseudogene predicted gene 8987
Lbw6 18 74429267 to 74429343 76 QTL lupus NZB x NZW 6
D18Mit8 18 74429267 to 74429343 76 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 8
Idd21.1 18 74429267 to 84126470 9697203 QTL insulin dependent diabetes susceptibility 21.1
Cpgi10219 18 74440861 to 74441016 155 CpG island CpG island 10219
Cpgi10220 18 74442005 to 74443313 1308 CpG island CpG island 10220
Tssr151913 18 74442352 to 74442364 12 + TSS region transcription start site region 151913
Myo5b 18 74442380 to 74772698 330318 + protein coding gene myosin VB
Tssr151914 18 74442398 to 74442409 11 + TSS region transcription start site region 151914
Tssr151915 18 74442424 to 74442436 12 + TSS region transcription start site region 151915
Tssr151916 18 74442463 to 74442479 16 + TSS region transcription start site region 151916
Tssr151917 18 74442500 to 74442532 32 + TSS region transcription start site region 151917
Tssr151918 18 74442551 to 74442631 80 + TSS region transcription start site region 151918
Tssr151919 18 74442654 to 74442664 10 + TSS region transcription start site region 151919
Cpgi10221 18 74443684 to 74444304 620 CpG island CpG island 10221
Cpgi10222 18 74444546 to 74444784 238 CpG island CpG island 10222
Tssr151920 18 74489260 to 74489264 4 + TSS region transcription start site region 151920
Tssr151921 18 74517194 to 74517200 6 + TSS region transcription start site region 151921
1700120E14Rik 18 74525140 to 74531124 5984 - antisense lncRNA gene RIKEN cDNA 1700120E14 gene
Tssr151922 18 74531233 to 74531250 17 + TSS region transcription start site region 151922
Tssr5372 18 74531255 to 74531260 5 + TSS region transcription start site region 5372