Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:73479252-73819515

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32022 18 73504781 to 73513888 9107 - lncRNA gene predicted gene, 32022
n-R5-8s1 18 73533403 to 73533550 147 - rRNA gene nuclear encoded rRNA 5.8S 1
Tssr151879 18 73551662 to 73551678 16 + TSS region transcription start site region 151879
Tssr151880 18 73551697 to 73551704 7 + TSS region transcription start site region 151880
Tssr151881 18 73556923 to 73556934 11 + TSS region transcription start site region 151881
Cpgi10202 18 73557893 to 73558109 216 CpG island CpG island 10202
Cpgi10203 18 73571957 to 73574194 2237 CpG island CpG island 10203
Tssr153877 18 73572276 to 73572314 38 - TSS region transcription start site region 153877
Tssr153878 18 73572345 to 73572360 15 - TSS region transcription start site region 153878
Tssr151882 18 73572697 to 73572712 15 + TSS region transcription start site region 151882
Tssr151883 18 73572755 to 73572836 81 + TSS region transcription start site region 151883
Tssr151884 18 73572842 to 73572882 40 + TSS region transcription start site region 151884
Mex3c 18 73573044 to 73592575 19531 + protein coding gene mex3 RNA binding family member C
Tssr151885 18 73573476 to 73573503 27 + TSS region transcription start site region 151885
Gm26438 18 73611516 to 73611622 106 + unclassified non-coding RNA gene predicted gene, 26438
Cpgi10204 18 73622734 to 73623755 1021 CpG island CpG island 10204
Gm22065 18 73624928 to 73625037 109 + miRNA gene predicted gene, 22065
Smad4 18 73639009 to 73703780 64771 - protein coding gene SMAD family member 4
D18Dev1 18 73649252 to 73649515 263 DNA segment DNA Segment, Chr 18, Devereux 1
Tssr153879 18 73662700 to 73662749 49 - TSS region transcription start site region 153879
4930578L24Rik 18 73701075 to 73705353 4278 + protein coding gene RIKEN cDNA 4930578L24 gene
Tssr153880 18 73701754 to 73701757 3 - TSS region transcription start site region 153880
Cpgi10205 18 73702830 to 73704337 1507 CpG island CpG island 10205
Tssr153881 18 73703739 to 73703806 67 - TSS region transcription start site region 153881
Gm32548 18 73711328 to 73717593 6265 + lncRNA gene predicted gene, 32548
Gm17943 18 73730764 to 73731433 669 + pseudogene predicted gene, 17943
Tssr153882 18 73734849 to 73734852 3 - TSS region transcription start site region 153882
Elac1 18 73735038 to 73754479 19441 - protein coding gene elaC ribonuclease Z 1
Cpgi10206 18 73753934 to 73755132 1198 CpG island CpG island 10206
Tssr151886 18 73754155 to 73754167 12 + TSS region transcription start site region 151886
Tssr5371 18 73754327 to 73754332 5 - TSS region transcription start site region 5371
Tssr153883 18 73754457 to 73754503 46 - TSS region transcription start site region 153883
Cpgi10207 18 73762306 to 73762716 410 CpG island CpG island 10207
Me2 18 73770040 to 73815392 45352 - protein coding gene malic enzyme 2, NAD(+)-dependent, mitochondrial
Tssr153884 18 73770507 to 73770510 3 - TSS region transcription start site region 153884
Cpgi10208 18 73814855 to 73816021 1166 CpG island CpG island 10208
Tssr153885 18 73815430 to 73815453 23 - TSS region transcription start site region 153885
Tssr153886 18 73815470 to 73815486 16 - TSS region transcription start site region 153886
Tssr153887 18 73815703 to 73815714 11 - TSS region transcription start site region 153887
Tssr153888 18 73815755 to 73815794 39 - TSS region transcription start site region 153888
Gm46631 18 73816197 to 73819183 2986 + lncRNA gene predicted gene, 46631
Tssr153889 18 73816503 to 73816543 40 - TSS region transcription start site region 153889