Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:72875000-73725000

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sicd5 18 72371061 to 72915854 544793 QTL seizure-induced cell death 5
Gm25509 18 72899882 to 72899987 105 - miRNA gene predicted gene, 25509
Gm31908 18 72908890 to 72921090 12200 - lncRNA gene predicted gene, 31908
Tssr153875 18 73179332 to 73179334 2 - TSS region transcription start site region 153875
Gm31960 18 73180410 to 73184544 4134 - lncRNA gene predicted gene, 31960
D18Mit211 18 73247953 to 73248079 126 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 211
Tssr153876 18 73251807 to 73251814 7 - TSS region transcription start site region 153876
V125Dq13 18 73300000 to 73300000 0 QTL vitamin D active form serum level QTL 13
Fgf23lq4 18 73300000 to 73300000 0 QTL FGF23 serum level QTL 4
Tssr5369 18 73301548 to 73301551 3 + TSS region transcription start site region 5369
Cpgi10201 18 73379433 to 73379628 195 CpG island CpG island 10201
Tssr5370 18 73382832 to 73382837 5 + TSS region transcription start site region 5370
Gm32022 18 73504781 to 73513888 9107 - lncRNA gene predicted gene, 32022
n-R5-8s1 18 73533403 to 73533550 147 - rRNA gene nuclear encoded rRNA 5.8S 1
Tssr151879 18 73551662 to 73551678 16 + TSS region transcription start site region 151879
Tssr151880 18 73551697 to 73551704 7 + TSS region transcription start site region 151880
Tssr151881 18 73556923 to 73556934 11 + TSS region transcription start site region 151881
Cpgi10202 18 73557893 to 73558109 216 CpG island CpG island 10202
Cpgi10203 18 73571957 to 73574194 2237 CpG island CpG island 10203
Tssr153877 18 73572276 to 73572314 38 - TSS region transcription start site region 153877
Tssr153878 18 73572345 to 73572360 15 - TSS region transcription start site region 153878
Tssr151882 18 73572697 to 73572712 15 + TSS region transcription start site region 151882
Tssr151883 18 73572755 to 73572836 81 + TSS region transcription start site region 151883
Tssr151884 18 73572842 to 73572882 40 + TSS region transcription start site region 151884
Mex3c 18 73573044 to 73592575 19531 + protein coding gene mex3 RNA binding family member C
Tssr151885 18 73573476 to 73573503 27 + TSS region transcription start site region 151885
Gm26438 18 73611516 to 73611622 106 + unclassified non-coding RNA gene predicted gene, 26438
Cpgi10204 18 73622734 to 73623755 1021 CpG island CpG island 10204
Gm22065 18 73624928 to 73625037 109 + miRNA gene predicted gene, 22065
Smad4 18 73639009 to 73703780 64771 - protein coding gene SMAD family member 4
D18Dev1 18 73649252 to 73649515 263 DNA segment DNA Segment, Chr 18, Devereux 1
Tssr153879 18 73662700 to 73662749 49 - TSS region transcription start site region 153879
4930578L24Rik 18 73701075 to 73705353 4278 + protein coding gene RIKEN cDNA 4930578L24 gene
Tssr153880 18 73701754 to 73701757 3 - TSS region transcription start site region 153880
Cpgi10205 18 73702830 to 73704337 1507 CpG island CpG island 10205
Tssr153881 18 73703739 to 73703806 67 - TSS region transcription start site region 153881
Gm32548 18 73711328 to 73717593 6265 + lncRNA gene predicted gene, 32548