Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:7060440-8750459

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Armc4 18 7088209 to 7297936 209727 - protein coding gene armadillo repeat containing 4
Gm18581 18 7107181 to 7108183 1002 - pseudogene predicted gene, 18581
D18Mit18 18 7116121 to 7116255 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 18
4930415O11Rik 18 7150343 to 7151776 1433 unclassified gene RIKEN cDNA 4930415O11 gene
Tssr152369 18 7273578 to 7273587 9 - TSS region transcription start site region 152369
Tssr152370 18 7297064 to 7297072 8 - TSS region transcription start site region 152370
Cpgi9684 18 7297759 to 7298044 285 CpG island CpG island 9684
Gm34979 18 7332445 to 7346299 13854 - lncRNA gene predicted gene, 34979
Tssr152371 18 7346010 to 7346014 4 - TSS region transcription start site region 152371
Mpp7 18 7347959 to 7626866 278907 - protein coding gene membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
Tssr152372 18 7373736 to 7373740 4 - TSS region transcription start site region 152372
D18Mit168 18 7464450 to 7464545 95 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 168
Gm18948 18 7548987 to 7549581 594 + pseudogene predicted gene, 18948
Fabp5l2 18 7581516 to 7581920 404 + pseudogene fatty acid binding protein 5-like 2
Tssr152373 18 7583781 to 7583788 7 - TSS region transcription start site region 152373
Tssr5241 18 7585699 to 7585706 7 + TSS region transcription start site region 5241
Tssr152374 18 7608331 to 7608335 4 - TSS region transcription start site region 152374
Cpgi9685 18 7608679 to 7608967 288 CpG island CpG island 9685
Tssr152375 18 7610599 to 7610604 5 - TSS region transcription start site region 152375
Tssr149977 18 7613980 to 7613990 10 + TSS region transcription start site region 149977
Cpgi9686 18 7626159 to 7627213 1054 CpG island CpG island 9686
Tssr152376 18 7626777 to 7626792 15 - TSS region transcription start site region 152376
Tssr152377 18 7626809 to 7626880 71 - TSS region transcription start site region 152377
Gm18763 18 7684530 to 7692726 8196 - pseudogene predicted gene, 18763
Cpgi9687 18 7692737 to 7693448 711 CpG island CpG island 9687
Tssr152378 18 7703655 to 7703659 4 - TSS region transcription start site region 152378
D18Mit167 18 7756397 to 7756498 101 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 167
Gm2336 18 7798784 to 7799900 1116 - pseudogene predicted gene 2336
Gm24292 18 7835177 to 7835283 106 + snRNA gene predicted gene, 24292
Gm50027 18 7844684 to 7844935 251 - pseudogene predicted gene, 50027
Gm9993 18 7868017 to 7869112 1095 unclassified non-coding RNA gene predicted gene 9993
Cpgi9688 18 7868436 to 7870121 1685 CpG island CpG island 9688
Tssr149978 18 7868473 to 7868494 21 + TSS region transcription start site region 149978
Tssr149979 18 7868823 to 7868862 39 + TSS region transcription start site region 149979
Wac 18 7868832 to 7929028 60196 + protein coding gene WW domain containing adaptor with coiled-coil
Tssr149980 18 7868877 to 7868888 11 + TSS region transcription start site region 149980
Tssr152379 18 7869061 to 7869124 63 - TSS region transcription start site region 152379
Tssr149981 18 7869139 to 7869152 13 + TSS region transcription start site region 149981
Tssr149982 18 7869159 to 7869209 50 + TSS region transcription start site region 149982
Tssr149983 18 7869214 to 7869226 12 + TSS region transcription start site region 149983
Tssr149984 18 7869307 to 7869329 22 + TSS region transcription start site region 149984
Tssr149985 18 7869342 to 7869381 39 + TSS region transcription start site region 149985
Tssr149986 18 7869707 to 7869727 20 + TSS region transcription start site region 149986
Tssr149987 18 7869875 to 7869898 23 + TSS region transcription start site region 149987
Tssr149988 18 7877543 to 7877584 41 + TSS region transcription start site region 149988
A430102J17Rik 18 7894299 to 7895791 1492 unclassified gene RIKEN cDNA A430102J17 gene
Tssr149989 18 7901490 to 7901506 16 + TSS region transcription start site region 149989
Tssr149990 18 7905440 to 7905459 19 + TSS region transcription start site region 149990
Tssr149991 18 7916018 to 7916034 16 + TSS region transcription start site region 149991
Tssr149992 18 7916114 to 7916130 16 + TSS region transcription start site region 149992
Tssr5242 18 7926033 to 7926038 5 + TSS region transcription start site region 5242
Gm7502 18 7932782 to 7933514 732 + pseudogene predicted gene 7502
Gm4833 18 8051203 to 8051992 789 + pseudogene predicted gene 4833
Tssr152380 18 8138053 to 8138056 3 - TSS region transcription start site region 152380
Gm35031 18 8180579 to 8192719 12140 + lncRNA gene predicted gene, 35031
Gm20147 18 8227514 to 8228006 492 - pseudogene predicted gene, 20147
Gm5500 18 8415129 to 8416047 918 + pseudogene predicted pseudogene 5500
D18Mit164 18 8523874 to 8524023 149 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 164
Tssr5243 18 8562035 to 8562039 4 - TSS region transcription start site region 5243
Gm35180 18 8673921 to 8718016 44095 - lncRNA gene predicted gene, 35180
Gm35232 18 8679051 to 8679292 241 + pseudogene predicted gene, 35232
Gm5819 18 8694099 to 8694537 438 + protein coding gene predicted gene 5819
Gm26119 18 8698253 to 8698356 103 - miRNA gene predicted gene, 26119