Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:70473491-71033494

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stard6 18 70472454 to 70501066 28612 + protein coding gene StAR-related lipid transfer (START) domain containing 6
Tssr151865 18 70474970 to 70474972 2 + TSS region transcription start site region 151865
Poli 18 70508680 to 70530620 21940 - protein coding gene polymerase (DNA directed), iota
Mir6357 18 70516786 to 70516889 103 + miRNA gene microRNA 6357
Tssr153839 18 70528609 to 70528614 5 - TSS region transcription start site region 153839
Cpgi10197 18 70529806 to 70530489 683 CpG island CpG island 10197
Tssr153840 18 70530219 to 70530284 65 - TSS region transcription start site region 153840
Tssr153841 18 70530313 to 70530326 13 - TSS region transcription start site region 153841
Tssr151866 18 70531167 to 70531175 8 + TSS region transcription start site region 151866
Gm31671 18 70559728 to 70568158 8430 - lncRNA gene predicted gene, 31671
Cpgi10198 18 70567963 to 70569269 1306 CpG island CpG island 10198
Tssr151867 18 70568268 to 70568398 130 + TSS region transcription start site region 151867
Mbd2 18 70568269 to 70626131 57862 + protein coding gene methyl-CpG binding domain protein 2
Tssr151868 18 70568426 to 70568506 80 + TSS region transcription start site region 151868
Tssr151869 18 70568861 to 70568898 37 + TSS region transcription start site region 151869
Tssr151870 18 70568899 to 70568942 43 + TSS region transcription start site region 151870
Tssr151871 18 70580698 to 70580733 35 + TSS region transcription start site region 151871
Tssr151872 18 70581060 to 70581065 5 + TSS region transcription start site region 151872
C230075M21Rik 18 70603551 to 70607590 4039 unclassified non-coding RNA gene RIKEN cDNA C230075M21 gene
Tssr151873 18 70607201 to 70607222 21 + TSS region transcription start site region 151873
Tssr151874 18 70621683 to 70621687 4 + TSS region transcription start site region 151874
Tssr151875 18 70622593 to 70622623 30 + TSS region transcription start site region 151875
Tssr151876 18 70622625 to 70622645 20 + TSS region transcription start site region 151876
Gm8934 18 70647092 to 70648082 990 - pseudogene predicted gene 8934
Gm41772 18 70648955 to 70650672 1717 + lncRNA gene predicted gene, 41772
Tssr5367 18 70753491 to 70753494 3 - TSS region transcription start site region 5367
Gm18963 18 70769480 to 70770081 601 + pseudogene predicted gene, 18963
Gm21046 18 70781887 to 70782942 1055 + pseudogene predicted gene, 21046
Tssr151877 18 70930787 to 70930788 1 + TSS region transcription start site region 151877