Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:69879262-76969461

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491 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgis1 18 53157950 to 76826598 23668648 QTL proteoglycan induced spondylitis 1
Idd21.2 18 61139376 to 74429343 13289967 QTL insulin dependent diabetes susceptibility 21.2
Ltpr8 18 63741832 to 76047170 12305338 QTL Leishmania tropica response 8
Gm36175 18 69887669 to 69896410 8741 + pseudogene predicted gene, 36175
Tssr5364 18 69923477 to 69923484 7 - TSS region transcription start site region 5364
Ccdc68 18 69925426 to 69969484 44058 + protein coding gene coiled-coil domain containing 68
Tssr151858 18 69925479 to 69925537 58 + TSS region transcription start site region 151858
Tssr151859 18 69925542 to 69925571 29 + TSS region transcription start site region 151859
1700061H18Rik 18 69943320 to 69969609 26289 - antisense lncRNA gene RIKEN cDNA 1700061H18 gene
Gm18528 18 69952901 to 69953891 990 - pseudogene predicted gene, 18528
4930448D08Rik 18 69969677 to 69972366 2689 + antisense lncRNA gene RIKEN cDNA 4930448D08 gene
Rab27b 18 69979131 to 70141605 162474 - protein coding gene RAB27B, member RAS oncogene family
Cpgi10195 18 70052950 to 70053469 519 CpG island CpG island 10195
Tssr153823 18 70053268 to 70053292 24 - TSS region transcription start site region 153823
Tssr153824 18 70053297 to 70053331 34 - TSS region transcription start site region 153824
Tssr153825 18 70053334 to 70053427 93 - TSS region transcription start site region 153825
Tssr153826 18 70053432 to 70053443 11 - TSS region transcription start site region 153826
Gm41770 18 70055123 to 70134833 79710 + lncRNA gene predicted gene, 41770
Tssr153827 18 70141568 to 70141622 54 - TSS region transcription start site region 153827
Par2 18 70229262 to 76619461 6390199 QTL pulmonary adenoma resistance 2
D18Mit103 18 70229262 to 70229376 114 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 103
Dynap 18 70240429 to 70244584 4155 - protein coding gene dynactin associated protein
Tssr153828 18 70244373 to 70244378 5 - TSS region transcription start site region 153828
Tssr153829 18 70244389 to 70244395 6 - TSS region transcription start site region 153829
Tssr153830 18 70244418 to 70244428 10 - TSS region transcription start site region 153830
Tssr153831 18 70244480 to 70244496 16 - TSS region transcription start site region 153831
Tssr153832 18 70244560 to 70244565 5 - TSS region transcription start site region 153832
Tssr153833 18 70244590 to 70244601 11 - TSS region transcription start site region 153833
Tssr153834 18 70244685 to 70244696 11 - TSS region transcription start site region 153834
Gm36255 18 70267410 to 70277194 9784 - pseudogene predicted gene, 36255
Tssr153835 18 70276206 to 70276213 7 - TSS region transcription start site region 153835
Tssr5365 18 70390788 to 70390793 5 + TSS region transcription start site region 5365
Gm31620 18 70412972 to 70421048 8076 - lncRNA gene predicted gene, 31620
Gm45879 18 70432355 to 70433856 1501 - pseudogene predicted gene 45879
4930503L19Rik 18 70452210 to 70472504 20294 - protein coding gene RIKEN cDNA 4930503L19 gene
Tssr153836 18 70462841 to 70462849 8 - TSS region transcription start site region 153836
Cpgi10196 18 70471748 to 70472948 1200 CpG island CpG island 10196
Tssr153837 18 70472339 to 70472408 69 - TSS region transcription start site region 153837
Tssr151860 18 70472406 to 70472455 49 + TSS region transcription start site region 151860
Tssr153838 18 70472429 to 70472520 91 - TSS region transcription start site region 153838
Stard6 18 70472454 to 70501066 28612 + protein coding gene StAR-related lipid transfer (START) domain containing 6
Tssr151861 18 70472457 to 70472471 14 + TSS region transcription start site region 151861
Tssr5366 18 70472554 to 70472557 3 + TSS region transcription start site region 5366
Tssr151862 18 70472559 to 70472575 16 + TSS region transcription start site region 151862
Tssr151863 18 70472621 to 70472635 14 + TSS region transcription start site region 151863
Tssr151864 18 70472660 to 70472675 15 + TSS region transcription start site region 151864
Tssr151865 18 70474970 to 70474972 2 + TSS region transcription start site region 151865
Poli 18 70508680 to 70530620 21940 - protein coding gene polymerase (DNA directed), iota
Mir6357 18 70516786 to 70516889 103 + miRNA gene microRNA 6357
Tssr153839 18 70528609 to 70528614 5 - TSS region transcription start site region 153839
Cpgi10197 18 70529806 to 70530489 683 CpG island CpG island 10197
Tssr153840 18 70530219 to 70530284 65 - TSS region transcription start site region 153840
Tssr153841 18 70530313 to 70530326 13 - TSS region transcription start site region 153841
Tssr151866 18 70531167 to 70531175 8 + TSS region transcription start site region 151866
Gm31671 18 70559728 to 70568158 8430 - lncRNA gene predicted gene, 31671
Cpgi10198 18 70567963 to 70569269 1306 CpG island CpG island 10198
Tssr151867 18 70568268 to 70568398 130 + TSS region transcription start site region 151867
Mbd2 18 70568269 to 70626131 57862 + protein coding gene methyl-CpG binding domain protein 2
Tssr151868 18 70568426 to 70568506 80 + TSS region transcription start site region 151868
Tssr151869 18 70568861 to 70568898 37 + TSS region transcription start site region 151869
Tssr151870 18 70568899 to 70568942 43 + TSS region transcription start site region 151870
Tssr151871 18 70580698 to 70580733 35 + TSS region transcription start site region 151871
Tssr151872 18 70581060 to 70581065 5 + TSS region transcription start site region 151872
C230075M21Rik 18 70603551 to 70607590 4039 unclassified non-coding RNA gene RIKEN cDNA C230075M21 gene
Tssr151873 18 70607201 to 70607222 21 + TSS region transcription start site region 151873
Tssr151874 18 70621683 to 70621687 4 + TSS region transcription start site region 151874
Tssr151875 18 70622593 to 70622623 30 + TSS region transcription start site region 151875
Tssr151876 18 70622625 to 70622645 20 + TSS region transcription start site region 151876
Gm8934 18 70647092 to 70648082 990 - pseudogene predicted gene 8934
Gm41772 18 70648955 to 70650672 1717 + lncRNA gene predicted gene, 41772
Tssr5367 18 70753491 to 70753494 3 - TSS region transcription start site region 5367
Gm18963 18 70769480 to 70770081 601 + pseudogene predicted gene, 18963
Gm21046 18 70781887 to 70782942 1055 + pseudogene predicted gene, 21046
Tssr151877 18 70930787 to 70930788 1 + TSS region transcription start site region 151877
Tssr153842 18 71255214 to 71255223 9 - TSS region transcription start site region 153842
Tssr153843 18 71255245 to 71255256 11 - TSS region transcription start site region 153843
Dcc 18 71258738 to 72351069 1092331 - protein coding gene deleted in colorectal carcinoma
Tssr153844 18 71506107 to 71506109 2 - TSS region transcription start site region 153844
Tssr153845 18 71741562 to 71741572 10 - TSS region transcription start site region 153845
Tssr153846 18 71803428 to 71803459 31 - TSS region transcription start site region 153846
D18Mit141 18 71874542 to 71874635 93 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 141
Tssr153847 18 71913844 to 71913849 5 - TSS region transcription start site region 153847
Tssr153848 18 71996531 to 71996532 1 - TSS region transcription start site region 153848
D18Mit186 18 72020418 to 72020542 124 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 186
Tssr151878 18 72033053 to 72033054 1 + TSS region transcription start site region 151878
Tssr153849 18 72141701 to 72141715 14 - TSS region transcription start site region 153849
Tssr153850 18 72144838 to 72144848 10 - TSS region transcription start site region 153850
Tssr153851 18 72148280 to 72148291 11 - TSS region transcription start site region 153851
5730478J17Rik 18 72157138 to 72158630 1492 unclassified gene RIKEN cDNA 5730478J17 gene
Tssr153852 18 72159090 to 72159100 10 - TSS region transcription start site region 153852
Tssr153853 18 72159180 to 72159189 9 - TSS region transcription start site region 153853
Tssr153854 18 72166233 to 72166281 48 - TSS region transcription start site region 153854
Tssr153855 18 72202594 to 72202598 4 - TSS region transcription start site region 153855
Tssr153856 18 72227932 to 72227950 18 - TSS region transcription start site region 153856
Tssr153857 18 72233604 to 72233649 45 - TSS region transcription start site region 153857
Tssr153858 18 72258772 to 72258784 12 - TSS region transcription start site region 153858
Tssr153859 18 72327648 to 72327660 12 - TSS region transcription start site region 153859
Tssr153860 18 72327779 to 72327817 38 - TSS region transcription start site region 153860
Tssr153861 18 72330603 to 72330626 23 - TSS region transcription start site region 153861
D18Abb2e 18 72331493 to 72331666 173 DNA segment DNA segment, Chr 18, Abbott 2 expressed
Tssr153862 18 72340201 to 72340211 10 - TSS region transcription start site region 153862
Tssr153863 18 72341708 to 72341712 4 - TSS region transcription start site region 153863
Cpgi10199 18 72348857 to 72349190 333 CpG island CpG island 10199
Tssr153864 18 72349856 to 72349872 16 - TSS region transcription start site region 153864
Tssr153865 18 72350393 to 72350405 12 - TSS region transcription start site region 153865
Cpgi10200 18 72350454 to 72351233 779 CpG island CpG island 10200
Tssr153866 18 72350495 to 72350567 72 - TSS region transcription start site region 153866
Tssr153867 18 72350791 to 72350815 24 - TSS region transcription start site region 153867
Tssr153868 18 72350984 to 72350993 9 - TSS region transcription start site region 153868
Tssr153869 18 72351009 to 72351022 13 - TSS region transcription start site region 153869
Tssr153870 18 72351029 to 72351073 44 - TSS region transcription start site region 153870
Tssr153871 18 72351076 to 72351087 11 - TSS region transcription start site region 153871
Tssr153872 18 72351090 to 72351108 18 - TSS region transcription start site region 153872
Tssr153873 18 72351137 to 72351156 19 - TSS region transcription start site region 153873
Sicd5 18 72371061 to 72915854 544793 QTL seizure-induced cell death 5
Gm6995 18 72426460 to 72427138 678 - pseudogene predicted gene 6995
Tssr5368 18 72443265 to 72443267 2 - TSS region transcription start site region 5368
D18Mit188 18 72612523 to 72612620 97 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 188
Pas7 18 72612523 to 84126470 11513947 QTL pulmonary adenoma susceptibility 7
Gm31819 18 72686426 to 72725083 38657 - lncRNA gene predicted gene, 31819
Tssr153874 18 72725033 to 72725070 37 - TSS region transcription start site region 153874
Gm25509 18 72899882 to 72899987 105 - miRNA gene predicted gene, 25509
Gm31908 18 72908890 to 72921090 12200 - lncRNA gene predicted gene, 31908
Tssr153875 18 73179332 to 73179334 2 - TSS region transcription start site region 153875
Gm31960 18 73180410 to 73184544 4134 - lncRNA gene predicted gene, 31960
D18Mit211 18 73247953 to 73248079 126 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 211
Tssr153876 18 73251807 to 73251814 7 - TSS region transcription start site region 153876
Fgf23lq4 18 73300000 to 73300000 0 QTL FGF23 serum level QTL 4
V125Dq13 18 73300000 to 73300000 0 QTL vitamin D active form serum level QTL 13
Tssr5369 18 73301548 to 73301551 3 + TSS region transcription start site region 5369
Cpgi10201 18 73379433 to 73379628 195 CpG island CpG island 10201
Tssr5370 18 73382832 to 73382837 5 + TSS region transcription start site region 5370
Gm32022 18 73504781 to 73513888 9107 - lncRNA gene predicted gene, 32022
n-R5-8s1 18 73533403 to 73533550 147 - rRNA gene nuclear encoded rRNA 5.8S 1
Tssr151879 18 73551662 to 73551678 16 + TSS region transcription start site region 151879
Tssr151880 18 73551697 to 73551704 7 + TSS region transcription start site region 151880
Tssr151881 18 73556923 to 73556934 11 + TSS region transcription start site region 151881
Cpgi10202 18 73557893 to 73558109 216 CpG island CpG island 10202
Cpgi10203 18 73571957 to 73574194 2237 CpG island CpG island 10203
Tssr153877 18 73572276 to 73572314 38 - TSS region transcription start site region 153877
Tssr153878 18 73572345 to 73572360 15 - TSS region transcription start site region 153878
Tssr151882 18 73572697 to 73572712 15 + TSS region transcription start site region 151882
Tssr151883 18 73572755 to 73572836 81 + TSS region transcription start site region 151883
Tssr151884 18 73572842 to 73572882 40 + TSS region transcription start site region 151884
Mex3c 18 73573044 to 73592575 19531 + protein coding gene mex3 RNA binding family member C
Tssr151885 18 73573476 to 73573503 27 + TSS region transcription start site region 151885
Gm26438 18 73611516 to 73611622 106 + unclassified non-coding RNA gene predicted gene, 26438
Cpgi10204 18 73622734 to 73623755 1021 CpG island CpG island 10204
Gm22065 18 73624928 to 73625037 109 + miRNA gene predicted gene, 22065
Smad4 18 73639009 to 73703780 64771 - protein coding gene SMAD family member 4
D18Dev1 18 73649252 to 73649515 263 DNA segment DNA Segment, Chr 18, Devereux 1
Tssr153879 18 73662700 to 73662749 49 - TSS region transcription start site region 153879
4930578L24Rik 18 73701075 to 73705353 4278 + protein coding gene RIKEN cDNA 4930578L24 gene
Tssr153880 18 73701754 to 73701757 3 - TSS region transcription start site region 153880
Cpgi10205 18 73702830 to 73704337 1507 CpG island CpG island 10205
Tssr153881 18 73703739 to 73703806 67 - TSS region transcription start site region 153881
Gm32548 18 73711328 to 73717593 6265 + lncRNA gene predicted gene, 32548
Gm17943 18 73730764 to 73731433 669 + pseudogene predicted gene, 17943
Tssr153882 18 73734849 to 73734852 3 - TSS region transcription start site region 153882
Elac1 18 73735038 to 73754479 19441 - protein coding gene elaC ribonuclease Z 1
Cpgi10206 18 73753934 to 73755132 1198 CpG island CpG island 10206
Tssr151886 18 73754155 to 73754167 12 + TSS region transcription start site region 151886
Tssr5371 18 73754327 to 73754332 5 - TSS region transcription start site region 5371
Tssr153883 18 73754457 to 73754503 46 - TSS region transcription start site region 153883
Cpgi10207 18 73762306 to 73762716 410 CpG island CpG island 10207
Me2 18 73770040 to 73815392 45352 - protein coding gene malic enzyme 2, NAD(+)-dependent, mitochondrial
Tssr153884 18 73770507 to 73770510 3 - TSS region transcription start site region 153884
Cpgi10208 18 73814855 to 73816021 1166 CpG island CpG island 10208
Tssr153885 18 73815430 to 73815453 23 - TSS region transcription start site region 153885
Tssr153886 18 73815470 to 73815486 16 - TSS region transcription start site region 153886
Tssr153887 18 73815703 to 73815714 11 - TSS region transcription start site region 153887
Tssr153888 18 73815755 to 73815794 39 - TSS region transcription start site region 153888
Gm46631 18 73816197 to 73819183 2986 + lncRNA gene predicted gene, 46631
Tssr153889 18 73816503 to 73816543 40 - TSS region transcription start site region 153889
Tssr153890 18 73836843 to 73836847 4 - TSS region transcription start site region 153890
Gm32661 18 73849882 to 73884056 34174 - lncRNA gene predicted gene, 32661
Tssr151887 18 73859366 to 73859399 33 + TSS region transcription start site region 151887
Mro 18 73859385 to 73881333 21948 + protein coding gene maestro
Tssr151888 18 73863194 to 73863215 21 + TSS region transcription start site region 151888
Cpgi10209 18 73863526 to 73863891 365 CpG island CpG island 10209
Tssr151889 18 73863615 to 73863648 33 + TSS region transcription start site region 151889
Tssr151890 18 73863692 to 73863713 21 + TSS region transcription start site region 151890
Tssr151891 18 73869978 to 73869990 12 + TSS region transcription start site region 151891
Tssr151892 18 73878234 to 73878242 8 + TSS region transcription start site region 151892
Tssr151893 18 73878541 to 73878543 2 + TSS region transcription start site region 151893
Mapk4 18 73928486 to 74065120 136634 - protein coding gene mitogen-activated protein kinase 4
Tssr153891 18 73928681 to 73928695 14 - TSS region transcription start site region 153891
Cpgi10210 18 73930273 to 73931177 904 CpG island CpG island 10210
Tssr151894 18 73948314 to 73948325 11 + TSS region transcription start site region 151894
Tssr153892 18 73948877 to 73948883 6 - TSS region transcription start site region 153892
Tssr151895 18 73949348 to 73949356 8 + TSS region transcription start site region 151895
Tssr151896 18 73963598 to 73963603 5 + TSS region transcription start site region 151896
Cpgi10211 18 73970030 to 73970407 377 CpG island CpG island 10211
Tssr153893 18 73970847 to 73970865 18 - TSS region transcription start site region 153893
Tssr153894 18 73971298 to 73971321 23 - TSS region transcription start site region 153894
Tssr153895 18 73971447 to 73971487 40 - TSS region transcription start site region 153895
D730045A05Rik 18 74017907 to 74020088 2181 + lincRNA gene RIKEN cDNA D730045A05 gene
Cpgi10212 18 74063585 to 74065564 1979 CpG island CpG island 10212
Tssr153896 18 74064899 to 74064943 44 - TSS region transcription start site region 153896
Tssr153897 18 74064945 to 74064963 18 - TSS region transcription start site region 153897