Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:69857554-71087557

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36175 18 69887669 to 69896410 8741 + pseudogene predicted gene, 36175
Tssr5364 18 69923477 to 69923484 7 - TSS region transcription start site region 5364
Ccdc68 18 69925426 to 69969484 44058 + protein coding gene coiled-coil domain containing 68
Tssr151858 18 69925479 to 69925537 58 + TSS region transcription start site region 151858
Tssr151859 18 69925542 to 69925571 29 + TSS region transcription start site region 151859
1700061H18Rik 18 69943320 to 69969609 26289 - antisense lncRNA gene RIKEN cDNA 1700061H18 gene
Gm18528 18 69952901 to 69953891 990 - pseudogene predicted gene, 18528
4930448D08Rik 18 69969677 to 69972366 2689 + antisense lncRNA gene RIKEN cDNA 4930448D08 gene
Rab27b 18 69979131 to 70141605 162474 - protein coding gene RAB27B, member RAS oncogene family
Cpgi10195 18 70052950 to 70053469 519 CpG island CpG island 10195
Tssr153823 18 70053268 to 70053292 24 - TSS region transcription start site region 153823
Tssr153824 18 70053297 to 70053331 34 - TSS region transcription start site region 153824
Tssr153825 18 70053334 to 70053427 93 - TSS region transcription start site region 153825
Tssr153826 18 70053432 to 70053443 11 - TSS region transcription start site region 153826
Gm41770 18 70055123 to 70134833 79710 + lncRNA gene predicted gene, 41770
Tssr153827 18 70141568 to 70141622 54 - TSS region transcription start site region 153827
Par2 18 70229262 to 76619461 6390199 QTL pulmonary adenoma resistance 2
D18Mit103 18 70229262 to 70229376 114 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 103
Dynap 18 70240429 to 70244584 4155 - protein coding gene dynactin associated protein
Tssr153828 18 70244373 to 70244378 5 - TSS region transcription start site region 153828
Tssr153829 18 70244389 to 70244395 6 - TSS region transcription start site region 153829
Tssr153830 18 70244418 to 70244428 10 - TSS region transcription start site region 153830
Tssr153831 18 70244480 to 70244496 16 - TSS region transcription start site region 153831
Tssr153832 18 70244560 to 70244565 5 - TSS region transcription start site region 153832
Tssr153833 18 70244590 to 70244601 11 - TSS region transcription start site region 153833
Tssr153834 18 70244685 to 70244696 11 - TSS region transcription start site region 153834
Gm36255 18 70267410 to 70277194 9784 - pseudogene predicted gene, 36255
Tssr153835 18 70276206 to 70276213 7 - TSS region transcription start site region 153835
Tssr5365 18 70390788 to 70390793 5 + TSS region transcription start site region 5365
Gm31620 18 70412972 to 70421048 8076 - lncRNA gene predicted gene, 31620
Gm45879 18 70432355 to 70433856 1501 - pseudogene predicted gene 45879
4930503L19Rik 18 70452210 to 70472504 20294 - protein coding gene RIKEN cDNA 4930503L19 gene
Tssr153836 18 70462841 to 70462849 8 - TSS region transcription start site region 153836
Cpgi10196 18 70471748 to 70472948 1200 CpG island CpG island 10196
Tssr153837 18 70472339 to 70472408 69 - TSS region transcription start site region 153837
Tssr151860 18 70472406 to 70472455 49 + TSS region transcription start site region 151860
Tssr153838 18 70472429 to 70472520 91 - TSS region transcription start site region 153838
Stard6 18 70472454 to 70501066 28612 + protein coding gene StAR-related lipid transfer (START) domain containing 6
Tssr151861 18 70472457 to 70472471 14 + TSS region transcription start site region 151861
Tssr5366 18 70472554 to 70472557 3 + TSS region transcription start site region 5366
Tssr151862 18 70472559 to 70472575 16 + TSS region transcription start site region 151862
Tssr151863 18 70472621 to 70472635 14 + TSS region transcription start site region 151863
Tssr151864 18 70472660 to 70472675 15 + TSS region transcription start site region 151864
Tssr151865 18 70474970 to 70474972 2 + TSS region transcription start site region 151865
Poli 18 70508680 to 70530620 21940 - protein coding gene polymerase (DNA directed), iota
Mir6357 18 70516786 to 70516889 103 + miRNA gene microRNA 6357
Tssr153839 18 70528609 to 70528614 5 - TSS region transcription start site region 153839
Cpgi10197 18 70529806 to 70530489 683 CpG island CpG island 10197
Tssr153840 18 70530219 to 70530284 65 - TSS region transcription start site region 153840
Tssr153841 18 70530313 to 70530326 13 - TSS region transcription start site region 153841
Tssr151866 18 70531167 to 70531175 8 + TSS region transcription start site region 151866
Gm31671 18 70559728 to 70568158 8430 - lncRNA gene predicted gene, 31671
Cpgi10198 18 70567963 to 70569269 1306 CpG island CpG island 10198
Tssr151867 18 70568268 to 70568398 130 + TSS region transcription start site region 151867
Mbd2 18 70568269 to 70626131 57862 + protein coding gene methyl-CpG binding domain protein 2
Tssr151868 18 70568426 to 70568506 80 + TSS region transcription start site region 151868
Tssr151869 18 70568861 to 70568898 37 + TSS region transcription start site region 151869
Tssr151870 18 70568899 to 70568942 43 + TSS region transcription start site region 151870
Tssr151871 18 70580698 to 70580733 35 + TSS region transcription start site region 151871
Tssr151872 18 70581060 to 70581065 5 + TSS region transcription start site region 151872
C230075M21Rik 18 70603551 to 70607590 4039 unclassified non-coding RNA gene RIKEN cDNA C230075M21 gene
Tssr151873 18 70607201 to 70607222 21 + TSS region transcription start site region 151873
Tssr151874 18 70621683 to 70621687 4 + TSS region transcription start site region 151874
Tssr151875 18 70622593 to 70622623 30 + TSS region transcription start site region 151875
Tssr151876 18 70622625 to 70622645 20 + TSS region transcription start site region 151876
Gm8934 18 70647092 to 70648082 990 - pseudogene predicted gene 8934
Gm41772 18 70648955 to 70650672 1717 + lncRNA gene predicted gene, 41772
Tssr5367 18 70753491 to 70753494 3 - TSS region transcription start site region 5367
Gm18963 18 70769480 to 70770081 601 + pseudogene predicted gene, 18963
Gm21046 18 70781887 to 70782942 1055 + pseudogene predicted gene, 21046
Tssr151877 18 70930787 to 70930788 1 + TSS region transcription start site region 151877