Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:69605426-70289484

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcf4 18 69344488 to 69687967 343479 + protein coding gene transcription factor 4
Tssr151846 18 69612635 to 69612644 9 + TSS region transcription start site region 151846
Tssr151847 18 69636889 to 69636910 21 + TSS region transcription start site region 151847
Gm31439 18 69636971 to 69654954 17983 - lncRNA gene predicted gene, 31439
Tssr151848 18 69638067 to 69638078 11 + TSS region transcription start site region 151848
Tssr151849 18 69645327 to 69645331 4 + TSS region transcription start site region 151849
Tssr151850 18 69649576 to 69649579 3 + TSS region transcription start site region 151850
Sicd4 18 69672205 to 85496018 15823813 QTL seizure-induced cell death 4
D18Mit33 18 69672205 to 69672345 140 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 33
Heal9 18 69672205 to 69672345 140 QTL wound healing/regeneration 9
Tssr151851 18 69677932 to 69677972 40 + TSS region transcription start site region 151851
Tssr151852 18 69679883 to 69679890 7 + TSS region transcription start site region 151852
Tssr151853 18 69683073 to 69683090 17 + TSS region transcription start site region 151853
Tssr151854 18 69683097 to 69683152 55 + TSS region transcription start site region 151854
Tssr151855 18 69684144 to 69684166 22 + TSS region transcription start site region 151855
Tssr151856 18 69686732 to 69686742 10 + TSS region transcription start site region 151856
Tssr151857 18 69686772 to 69686784 12 + TSS region transcription start site region 151857
Gm31502 18 69758902 to 69779782 20880 - lncRNA gene predicted gene, 31502
Gm22508 18 69777936 to 69778045 109 - unclassified non-coding RNA gene predicted gene, 22508
Tssr153822 18 69779722 to 69779771 49 - TSS region transcription start site region 153822
Gm31564 18 69795956 to 69798108 2152 + lncRNA gene predicted gene, 31564
Cpgi10194 18 69833551 to 69833738 187 CpG island CpG island 10194
Gm36175 18 69887669 to 69896410 8741 + pseudogene predicted gene, 36175
Tssr5364 18 69923477 to 69923484 7 - TSS region transcription start site region 5364
Ccdc68 18 69925426 to 69969484 44058 + protein coding gene coiled-coil domain containing 68
Tssr151858 18 69925479 to 69925537 58 + TSS region transcription start site region 151858
Tssr151859 18 69925542 to 69925571 29 + TSS region transcription start site region 151859
1700061H18Rik 18 69943320 to 69969609 26289 - antisense lncRNA gene RIKEN cDNA 1700061H18 gene
Gm18528 18 69952901 to 69953891 990 - pseudogene predicted gene, 18528
4930448D08Rik 18 69969677 to 69972366 2689 + antisense lncRNA gene RIKEN cDNA 4930448D08 gene
Rab27b 18 69979131 to 70141605 162474 - protein coding gene RAB27B, member RAS oncogene family
Cpgi10195 18 70052950 to 70053469 519 CpG island CpG island 10195
Tssr153823 18 70053268 to 70053292 24 - TSS region transcription start site region 153823
Tssr153824 18 70053297 to 70053331 34 - TSS region transcription start site region 153824
Tssr153825 18 70053334 to 70053427 93 - TSS region transcription start site region 153825
Tssr153826 18 70053432 to 70053443 11 - TSS region transcription start site region 153826
Gm41770 18 70055123 to 70134833 79710 + lncRNA gene predicted gene, 41770
Tssr153827 18 70141568 to 70141622 54 - TSS region transcription start site region 153827
Par2 18 70229262 to 76619461 6390199 QTL pulmonary adenoma resistance 2
D18Mit103 18 70229262 to 70229376 114 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 103
Dynap 18 70240429 to 70244584 4155 - protein coding gene dynactin associated protein
Tssr153828 18 70244373 to 70244378 5 - TSS region transcription start site region 153828
Tssr153829 18 70244389 to 70244395 6 - TSS region transcription start site region 153829
Tssr153830 18 70244418 to 70244428 10 - TSS region transcription start site region 153830
Tssr153831 18 70244480 to 70244496 16 - TSS region transcription start site region 153831
Tssr153832 18 70244560 to 70244565 5 - TSS region transcription start site region 153832
Tssr153833 18 70244590 to 70244601 11 - TSS region transcription start site region 153833
Tssr153834 18 70244685 to 70244696 11 - TSS region transcription start site region 153834
Gm36255 18 70267410 to 70277194 9784 - pseudogene predicted gene, 36255
Tssr153835 18 70276206 to 70276213 7 - TSS region transcription start site region 153835