Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:68298052-68665629

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thcr 18 44997537 to 68645706 23648169 QTL T helper cell response
Radpf4 18 52833084 to 68645706 15812622 QTL radiation pulmonary fibrosis 4
Ett1 18 66541078 to 68535397 1994319 QTL experimentally induced testicular teratoma 1
Fam210a 18 68260187 to 68300333 40146 - protein coding gene family with sequence similarity 210, member A
Cpgi10186 18 68299584 to 68300850 1266 CpG island CpG island 10186
Tssr153806 18 68300149 to 68300193 44 - TSS region transcription start site region 153806
Tssr153807 18 68300194 to 68300228 34 - TSS region transcription start site region 153807
Tssr153808 18 68300240 to 68300259 19 - TSS region transcription start site region 153808
Tssr153809 18 68300329 to 68300336 7 - TSS region transcription start site region 153809
Tssr151782 18 68300345 to 68300348 3 + TSS region transcription start site region 151782
Tssr151783 18 68300351 to 68300409 58 + TSS region transcription start site region 151783
Rnmt 18 68300355 to 68324852 24497 + protein coding gene RNA (guanine-7-) methyltransferase
Tssr151784 18 68314551 to 68314563 12 + TSS region transcription start site region 151784
Tssr151785 18 68319003 to 68319019 16 + TSS region transcription start site region 151785
Cpgi10187 18 68337428 to 68337606 178 CpG island CpG island 10187
Tssr151786 18 68337504 to 68337517 13 + TSS region transcription start site region 151786
Tssr151787 18 68337545 to 68337546 1 + TSS region transcription start site region 151787
Mc5r 18 68337603 to 68339711 2108 + protein coding gene melanocortin 5 receptor
A030001D16Rik 18 68340371 to 68342445 2074 unclassified gene RIKEN cDNA A030001D16 gene
Tssr151788 18 68340393 to 68340396 3 + TSS region transcription start site region 151788
Tssr151789 18 68344403 to 68344418 15 + TSS region transcription start site region 151789
Tssr151790 18 68344450 to 68344465 15 + TSS region transcription start site region 151790
Tssr151791 18 68344482 to 68344518 36 + TSS region transcription start site region 151791
Tssr151792 18 68344523 to 68344535 12 + TSS region transcription start site region 151792
Tssr151793 18 68344773 to 68344788 15 + TSS region transcription start site region 151793
Gm29677 18 68398052 to 68565629 167577 + unclassified gene predicted gene, 29677
Tssr151794 18 68398128 to 68398136 8 + TSS region transcription start site region 151794
Tssr151795 18 68398931 to 68398935 4 + TSS region transcription start site region 151795
Mc2r 18 68406907 to 68429251 22344 - protein coding gene melanocortin 2 receptor
Tssr153810 18 68427879 to 68427913 34 - TSS region transcription start site region 153810
Tssr153811 18 68429235 to 68429258 23 - TSS region transcription start site region 153811
Tssr153812 18 68429263 to 68429268 5 - TSS region transcription start site region 153812
Tssr153813 18 68429280 to 68429293 13 - TSS region transcription start site region 153813
Tssr153814 18 68429315 to 68429320 5 - TSS region transcription start site region 153814
Tssr151796 18 68442324 to 68442334 10 + TSS region transcription start site region 151796
D18Mit39 18 68442485 to 68442708 223 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 39
Gm41765 18 68443877 to 68469292 25415 - lncRNA gene predicted gene, 41765
Tssr153815 18 68449254 to 68449268 14 - TSS region transcription start site region 153815
1700127G19Rik 18 68474712 to 68475211 499 unclassified gene RIKEN cDNA 1700127G19 gene
Tssr153816 18 68475162 to 68475173 11 - TSS region transcription start site region 153816
Hdlq30 18 68535229 to 68535397 168 QTL HDL QTL 30
D18Mit9 18 68535229 to 68535397 168 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 9
Par5 18 68535229 to 68535397 168 QTL pulmonary adenoma resistance 5
Gm30700 18 68551066 to 68590899 39833 - lncRNA gene predicted gene, 30700
Gm30641 18 68577851 to 68586338 8487 + lincRNA gene predicted gene, 30641
Tssr153817 18 68589441 to 68589445 4 - TSS region transcription start site region 153817
Tssr153818 18 68590877 to 68590889 12 - TSS region transcription start site region 153818
Gm30821 18 68591012 to 68709309 118297 + lncRNA gene predicted gene, 30821
Tssr5363 18 68629304 to 68629312 8 + TSS region transcription start site region 5363
D18Mit207 18 68645586 to 68645706 120 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 207