Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:68239450-68449465

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ldlrad4 18 67933257 to 68255549 322292 + protein coding gene low density lipoprotein receptor class A domain containing 4
Fam210a 18 68260187 to 68300333 40146 - protein coding gene family with sequence similarity 210, member A
Mir7219 18 68260920 to 68260973 53 - miRNA gene microRNA 7219
Tssr153805 18 68268627 to 68268632 5 - TSS region transcription start site region 153805
Tssr151781 18 68272832 to 68272841 9 + TSS region transcription start site region 151781
Cpgi10186 18 68299584 to 68300850 1266 CpG island CpG island 10186
Tssr153806 18 68300149 to 68300193 44 - TSS region transcription start site region 153806
Tssr153807 18 68300194 to 68300228 34 - TSS region transcription start site region 153807
Tssr153808 18 68300240 to 68300259 19 - TSS region transcription start site region 153808
Tssr153809 18 68300329 to 68300336 7 - TSS region transcription start site region 153809
Tssr151782 18 68300345 to 68300348 3 + TSS region transcription start site region 151782
Tssr151783 18 68300351 to 68300409 58 + TSS region transcription start site region 151783
Rnmt 18 68300355 to 68324852 24497 + protein coding gene RNA (guanine-7-) methyltransferase
Tssr151784 18 68314551 to 68314563 12 + TSS region transcription start site region 151784
Tssr151785 18 68319003 to 68319019 16 + TSS region transcription start site region 151785
Cpgi10187 18 68337428 to 68337606 178 CpG island CpG island 10187
Tssr151786 18 68337504 to 68337517 13 + TSS region transcription start site region 151786
Tssr151787 18 68337545 to 68337546 1 + TSS region transcription start site region 151787
Mc5r 18 68337603 to 68339711 2108 + protein coding gene melanocortin 5 receptor
A030001D16Rik 18 68340371 to 68342445 2074 unclassified gene RIKEN cDNA A030001D16 gene
Tssr151788 18 68340393 to 68340396 3 + TSS region transcription start site region 151788
Tssr151789 18 68344403 to 68344418 15 + TSS region transcription start site region 151789
Tssr151790 18 68344450 to 68344465 15 + TSS region transcription start site region 151790
Tssr151791 18 68344482 to 68344518 36 + TSS region transcription start site region 151791
Tssr151792 18 68344523 to 68344535 12 + TSS region transcription start site region 151792
Tssr151793 18 68344773 to 68344788 15 + TSS region transcription start site region 151793
Gm29677 18 68398052 to 68565629 167577 + unclassified gene predicted gene, 29677
Tssr151794 18 68398128 to 68398136 8 + TSS region transcription start site region 151794
Tssr151795 18 68398931 to 68398935 4 + TSS region transcription start site region 151795
Mc2r 18 68406907 to 68429251 22344 - protein coding gene melanocortin 2 receptor
Tssr153810 18 68427879 to 68427913 34 - TSS region transcription start site region 153810
Tssr153811 18 68429235 to 68429258 23 - TSS region transcription start site region 153811
Tssr153812 18 68429263 to 68429268 5 - TSS region transcription start site region 153812
Tssr153813 18 68429280 to 68429293 13 - TSS region transcription start site region 153813
Tssr153814 18 68429315 to 68429320 5 - TSS region transcription start site region 153814
Tssr151796 18 68442324 to 68442334 10 + TSS region transcription start site region 151796
D18Mit39 18 68442485 to 68442708 223 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 39
Gm41765 18 68443877 to 68469292 25415 - lncRNA gene predicted gene, 41765
Tssr153815 18 68449254 to 68449268 14 - TSS region transcription start site region 153815