Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:67864523-68824535

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thcr 18 44997537 to 68645706 23648169 QTL T helper cell response
Radpf4 18 52833084 to 68645706 15812622 QTL radiation pulmonary fibrosis 4
Ett1 18 66541078 to 68535397 1994319 QTL experimentally induced testicular teratoma 1
Cep192 18 67800107 to 67885170 85063 + protein coding gene centrosomal protein 192
D18Mit100 18 67900644 to 67900770 126 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 100
Gm8887 18 67907627 to 67908925 1298 + pseudogene predicted gene 8887
Tgq1 18 67919085 to 67919240 155 QTL triglyceride QTL 1
D18Mit50 18 67919085 to 67919240 155 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 50
Modvl5 18 67919085 to 67919240 155 QTL modifier of vacuolated lens 5
Cpgi10184 18 67932539 to 67934315 1776 CpG island CpG island 10184
Tssr151763 18 67933038 to 67933101 63 + TSS region transcription start site region 151763
Ldlrad4 18 67933257 to 68255549 322292 + protein coding gene low density lipoprotein receptor class A domain containing 4
Tssr151764 18 67933287 to 67933307 20 + TSS region transcription start site region 151764
Tssr151765 18 67933500 to 67933521 21 + TSS region transcription start site region 151765
Tssr151766 18 67933974 to 67933992 18 + TSS region transcription start site region 151766
Tssr151767 18 67933997 to 67934017 20 + TSS region transcription start site region 151767
Tssr151768 18 67934077 to 67934097 20 + TSS region transcription start site region 151768
Tssr151769 18 67934110 to 67934136 26 + TSS region transcription start site region 151769
Tssr151770 18 67934747 to 67934750 3 + TSS region transcription start site region 151770
Tssr151771 18 67935989 to 67935995 6 + TSS region transcription start site region 151771
5930405F01Rik 18 67946135 to 67949066 2931 unclassified gene RIKEN cDNA 5930405F01 gene
2210414L08Rik 18 67968191 to 67968982 791 unclassified gene RIKEN cDNA 2210414L08 gene
Tssr151772 18 67972339 to 67972351 12 + TSS region transcription start site region 151772
Tssr5362 18 68007498 to 68007509 11 + TSS region transcription start site region 5362
Tssr151773 18 68047020 to 68047024 4 + TSS region transcription start site region 151773
Tssr151774 18 68059697 to 68059710 13 + TSS region transcription start site region 151774
Tssr151775 18 68160186 to 68160194 8 + TSS region transcription start site region 151775
Gm18149 18 68168426 to 68168969 543 - pseudogene predicted gene, 18149
Cpgi10185 18 68189793 to 68189993 200 CpG island CpG island 10185
Tssr153802 18 68214508 to 68214521 13 - TSS region transcription start site region 153802
Tssr153803 18 68227614 to 68227633 19 - TSS region transcription start site region 153803
Tssr151776 18 68227838 to 68227880 42 + TSS region transcription start site region 151776
Tssr151777 18 68227928 to 68227975 47 + TSS region transcription start site region 151777
Tssr151778 18 68227987 to 68228002 15 + TSS region transcription start site region 151778
Tssr151779 18 68228035 to 68228048 13 + TSS region transcription start site region 151779
Tssr151780 18 68228055 to 68228087 32 + TSS region transcription start site region 151780
Tssr153804 18 68231080 to 68231094 14 - TSS region transcription start site region 153804
Fam210a 18 68260187 to 68300333 40146 - protein coding gene family with sequence similarity 210, member A
Mir7219 18 68260920 to 68260973 53 - miRNA gene microRNA 7219
Tssr153805 18 68268627 to 68268632 5 - TSS region transcription start site region 153805
Tssr151781 18 68272832 to 68272841 9 + TSS region transcription start site region 151781
Cpgi10186 18 68299584 to 68300850 1266 CpG island CpG island 10186
Tssr153806 18 68300149 to 68300193 44 - TSS region transcription start site region 153806
Tssr153807 18 68300194 to 68300228 34 - TSS region transcription start site region 153807
Tssr153808 18 68300240 to 68300259 19 - TSS region transcription start site region 153808
Tssr153809 18 68300329 to 68300336 7 - TSS region transcription start site region 153809
Tssr151782 18 68300345 to 68300348 3 + TSS region transcription start site region 151782
Tssr151783 18 68300351 to 68300409 58 + TSS region transcription start site region 151783
Rnmt 18 68300355 to 68324852 24497 + protein coding gene RNA (guanine-7-) methyltransferase
Tssr151784 18 68314551 to 68314563 12 + TSS region transcription start site region 151784
Tssr151785 18 68319003 to 68319019 16 + TSS region transcription start site region 151785
Cpgi10187 18 68337428 to 68337606 178 CpG island CpG island 10187
Tssr151786 18 68337504 to 68337517 13 + TSS region transcription start site region 151786
Tssr151787 18 68337545 to 68337546 1 + TSS region transcription start site region 151787
Mc5r 18 68337603 to 68339711 2108 + protein coding gene melanocortin 5 receptor
A030001D16Rik 18 68340371 to 68342445 2074 unclassified gene RIKEN cDNA A030001D16 gene
Tssr151788 18 68340393 to 68340396 3 + TSS region transcription start site region 151788
Tssr151789 18 68344403 to 68344418 15 + TSS region transcription start site region 151789
Tssr151790 18 68344450 to 68344465 15 + TSS region transcription start site region 151790
Tssr151791 18 68344482 to 68344518 36 + TSS region transcription start site region 151791
Tssr151792 18 68344523 to 68344535 12 + TSS region transcription start site region 151792
Tssr151793 18 68344773 to 68344788 15 + TSS region transcription start site region 151793
Gm29677 18 68398052 to 68565629 167577 + unclassified gene predicted gene, 29677
Tssr151794 18 68398128 to 68398136 8 + TSS region transcription start site region 151794
Tssr151795 18 68398931 to 68398935 4 + TSS region transcription start site region 151795
Mc2r 18 68406907 to 68429251 22344 - protein coding gene melanocortin 2 receptor
Tssr153810 18 68427879 to 68427913 34 - TSS region transcription start site region 153810
Tssr153811 18 68429235 to 68429258 23 - TSS region transcription start site region 153811
Tssr153812 18 68429263 to 68429268 5 - TSS region transcription start site region 153812
Tssr153813 18 68429280 to 68429293 13 - TSS region transcription start site region 153813
Tssr153814 18 68429315 to 68429320 5 - TSS region transcription start site region 153814
Tssr151796 18 68442324 to 68442334 10 + TSS region transcription start site region 151796
D18Mit39 18 68442485 to 68442708 223 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 39
Gm41765 18 68443877 to 68469292 25415 - lncRNA gene predicted gene, 41765
Tssr153815 18 68449254 to 68449268 14 - TSS region transcription start site region 153815
1700127G19Rik 18 68474712 to 68475211 499 unclassified gene RIKEN cDNA 1700127G19 gene
Tssr153816 18 68475162 to 68475173 11 - TSS region transcription start site region 153816
Par5 18 68535229 to 68535397 168 QTL pulmonary adenoma resistance 5
D18Mit9 18 68535229 to 68535397 168 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 9
Hdlq30 18 68535229 to 68535397 168 QTL HDL QTL 30
Gm30700 18 68551066 to 68590899 39833 - lncRNA gene predicted gene, 30700
Gm30641 18 68577851 to 68586338 8487 + lincRNA gene predicted gene, 30641
Tssr153817 18 68589441 to 68589445 4 - TSS region transcription start site region 153817
Tssr153818 18 68590877 to 68590889 12 - TSS region transcription start site region 153818
Gm30821 18 68591012 to 68709309 118297 + lncRNA gene predicted gene, 30821
Tssr5363 18 68629304 to 68629312 8 + TSS region transcription start site region 5363
D18Mit207 18 68645586 to 68645706 120 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 207
Tssr151797 18 68692050 to 68692062 12 + TSS region transcription start site region 151797
Tssr151798 18 68692097 to 68692130 33 + TSS region transcription start site region 151798
Tssr153819 18 68704411 to 68704433 22 - TSS region transcription start site region 153819
Gm41766 18 68713643 to 68718226 4583 + lncRNA gene predicted gene, 41766
Mir6356 18 68739400 to 68739501 101 + miRNA gene microRNA 6356
Gm41767 18 68789565 to 68795213 5648 + lncRNA gene predicted gene, 41767