Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:6780343-7521776

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab18 18 6765167 to 6791606 26439 + protein coding gene RAB18, member RAS oncogene family
Gm50081 18 6788768 to 6792137 3369 + sense overlapping lncRNA gene predicted gene, 50081
Tssr149976 18 6788906 to 6788911 5 + TSS region transcription start site region 149976
Gm2350 18 6910459 to 6936621 26162 - unclassified gene predicted gene 2350
Mkx 18 6934966 to 7004779 69813 - protein coding gene mohawk homeobox
Tssr152367 18 6983603 to 6983607 4 - TSS region transcription start site region 152367
Cpgi9681 18 7000569 to 7000748 179 CpG island CpG island 9681
Cpgi9682 18 7001452 to 7002715 1263 CpG island CpG island 9682
Cpgi9683 18 7003380 to 7005403 2023 CpG island CpG island 9683
Tssr152368 18 7004717 to 7004733 16 - TSS region transcription start site region 152368
Gm46633 18 7004963 to 7006405 1442 + lncRNA gene predicted gene, 46633
Gm10350 18 7043909 to 7044135 226 - pseudogene predicted gene 10350
Armc4 18 7088209 to 7297936 209727 - protein coding gene armadillo repeat containing 4
Gm18581 18 7107181 to 7108183 1002 - pseudogene predicted gene, 18581
D18Mit18 18 7116121 to 7116255 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 18
4930415O11Rik 18 7150343 to 7151776 1433 unclassified gene RIKEN cDNA 4930415O11 gene
Tssr152369 18 7273578 to 7273587 9 - TSS region transcription start site region 152369
Tssr152370 18 7297064 to 7297072 8 - TSS region transcription start site region 152370
Cpgi9684 18 7297759 to 7298044 285 CpG island CpG island 9684
Gm34979 18 7332445 to 7346299 13854 - lncRNA gene predicted gene, 34979
Tssr152371 18 7346010 to 7346014 4 - TSS region transcription start site region 152371
Mpp7 18 7347959 to 7626866 278907 - protein coding gene membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
Tssr152372 18 7373736 to 7373740 4 - TSS region transcription start site region 152372
D18Mit168 18 7464450 to 7464545 95 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 168