Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:67565644-68235770

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spire1 18 67488209 to 67610790 122581 - protein coding gene spire type actin nucleation factor 1
Tssr153777 18 67601414 to 67601421 7 - TSS region transcription start site region 153777
Cpgi10179 18 67610116 to 67611324 1208 CpG island CpG island 10179
Tssr153778 18 67610733 to 67610734 1 - TSS region transcription start site region 153778
Tssr153779 18 67610761 to 67610770 9 - TSS region transcription start site region 153779
Tssr5361 18 67610784 to 67610800 16 - TSS region transcription start site region 5361
Tssr153780 18 67610802 to 67610808 6 - TSS region transcription start site region 153780
Tssr153781 18 67610822 to 67610852 30 - TSS region transcription start site region 153781
Tssr153782 18 67610858 to 67610915 57 - TSS region transcription start site region 153782
Cep76 18 67617397 to 67641336 23939 - protein coding gene centrosomal protein 76
Tssr153783 18 67631659 to 67631663 4 - TSS region transcription start site region 153783
Cpgi10180 18 67640547 to 67641992 1445 CpG island CpG island 10180
Tssr153784 18 67641257 to 67641284 27 - TSS region transcription start site region 153784
Tssr153785 18 67641307 to 67641325 18 - TSS region transcription start site region 153785
Tssr153786 18 67641329 to 67641349 20 - TSS region transcription start site region 153786
Tssr153787 18 67641359 to 67641378 19 - TSS region transcription start site region 153787
Tssr151746 18 67641562 to 67641586 24 + TSS region transcription start site region 151746
Tssr151747 18 67641589 to 67641630 41 + TSS region transcription start site region 151747
Psmg2 18 67641599 to 67654162 12563 + protein coding gene proteasome (prosome, macropain) assembly chaperone 2
Tssr151748 18 67641631 to 67641642 11 + TSS region transcription start site region 151748
Ptpn2 18 67665511 to 67724595 59084 - protein coding gene protein tyrosine phosphatase, non-receptor type 2
Tssr151749 18 67668289 to 67668314 25 + TSS region transcription start site region 151749
Tssr153788 18 67669222 to 67669228 6 - TSS region transcription start site region 153788
Tssr153789 18 67675757 to 67675769 12 - TSS region transcription start site region 153789
Tssr153790 18 67675870 to 67675882 12 - TSS region transcription start site region 153790
Tssr153791 18 67677739 to 67677756 17 - TSS region transcription start site region 153791
Tssr153792 18 67677777 to 67677814 37 - TSS region transcription start site region 153792
Tssr153793 18 67680874 to 67680906 32 - TSS region transcription start site region 153793
Tssr151750 18 67700636 to 67700643 7 + TSS region transcription start site region 151750
Tssr153794 18 67718675 to 67718713 38 - TSS region transcription start site region 153794
Cpgi10181 18 67723686 to 67724806 1120 CpG island CpG island 10181
Tssr153795 18 67724286 to 67724307 21 - TSS region transcription start site region 153795
Tssr153796 18 67724526 to 67724559 33 - TSS region transcription start site region 153796
Tssr153797 18 67724560 to 67724599 39 - TSS region transcription start site region 153797
Gm46626 18 67761711 to 67768659 6948 - lncRNA gene predicted gene, 46626
Gm26910 18 67773712 to 67774857 1145 - lincRNA gene predicted gene, 26910
Cpgi10182 18 67774536 to 67775864 1328 CpG island CpG island 10182
Tssr153798 18 67774681 to 67774704 23 - TSS region transcription start site region 153798
Tssr153799 18 67774710 to 67774759 49 - TSS region transcription start site region 153799
Tssr151751 18 67774779 to 67774819 40 + TSS region transcription start site region 151751
Seh1l 18 67774876 to 67795461 20585 + protein coding gene SEH1-like (S. cerevisiae
Tssr151752 18 67774879 to 67774882 3 + TSS region transcription start site region 151752
Tssr151753 18 67774894 to 67774915 21 + TSS region transcription start site region 151753
Tssr151754 18 67774919 to 67774934 15 + TSS region transcription start site region 151754
Tssr151755 18 67774970 to 67774981 11 + TSS region transcription start site region 151755
Tssr151756 18 67774984 to 67775021 37 + TSS region transcription start site region 151756
Tssr153800 18 67775220 to 67775252 32 - TSS region transcription start site region 153800
Tssr151757 18 67775743 to 67775747 4 + TSS region transcription start site region 151757
4930549G23Rik 18 67776033 to 67799943 23910 - lncRNA gene RIKEN cDNA 4930549G23 gene
Tssr151758 18 67794449 to 67794462 13 + TSS region transcription start site region 151758
Tssr151759 18 67794577 to 67794589 12 + TSS region transcription start site region 151759
Cpgi10183 18 67799819 to 67800519 700 CpG island CpG island 10183
Tssr153801 18 67799924 to 67799975 51 - TSS region transcription start site region 153801
Tssr151760 18 67800101 to 67800147 46 + TSS region transcription start site region 151760
Cep192 18 67800107 to 67885170 85063 + protein coding gene centrosomal protein 192
Tssr151761 18 67800567 to 67800583 16 + TSS region transcription start site region 151761
Tssr151762 18 67815487 to 67815501 14 + TSS region transcription start site region 151762
D18Mit100 18 67900644 to 67900770 126 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 100
Gm8887 18 67907627 to 67908925 1298 + pseudogene predicted gene 8887
Modvl5 18 67919085 to 67919240 155 QTL modifier of vacuolated lens 5
Tgq1 18 67919085 to 67919240 155 QTL triglyceride QTL 1
D18Mit50 18 67919085 to 67919240 155 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 50
Cpgi10184 18 67932539 to 67934315 1776 CpG island CpG island 10184
Tssr151763 18 67933038 to 67933101 63 + TSS region transcription start site region 151763
Ldlrad4 18 67933257 to 68255549 322292 + protein coding gene low density lipoprotein receptor class A domain containing 4
Tssr151764 18 67933287 to 67933307 20 + TSS region transcription start site region 151764
Tssr151765 18 67933500 to 67933521 21 + TSS region transcription start site region 151765
Tssr151766 18 67933974 to 67933992 18 + TSS region transcription start site region 151766
Tssr151767 18 67933997 to 67934017 20 + TSS region transcription start site region 151767
Tssr151768 18 67934077 to 67934097 20 + TSS region transcription start site region 151768
Tssr151769 18 67934110 to 67934136 26 + TSS region transcription start site region 151769
Tssr151770 18 67934747 to 67934750 3 + TSS region transcription start site region 151770
Tssr151771 18 67935989 to 67935995 6 + TSS region transcription start site region 151771
5930405F01Rik 18 67946135 to 67949066 2931 unclassified gene RIKEN cDNA 5930405F01 gene
2210414L08Rik 18 67968191 to 67968982 791 unclassified gene RIKEN cDNA 2210414L08 gene
Tssr151772 18 67972339 to 67972351 12 + TSS region transcription start site region 151772
Tssr5362 18 68007498 to 68007509 11 + TSS region transcription start site region 5362
Tssr151773 18 68047020 to 68047024 4 + TSS region transcription start site region 151773
Tssr151774 18 68059697 to 68059710 13 + TSS region transcription start site region 151774
Tssr151775 18 68160186 to 68160194 8 + TSS region transcription start site region 151775
Gm18149 18 68168426 to 68168969 543 - pseudogene predicted gene, 18149
Cpgi10185 18 68189793 to 68189993 200 CpG island CpG island 10185
Tssr153802 18 68214508 to 68214521 13 - TSS region transcription start site region 153802
Tssr153803 18 68227614 to 68227633 19 - TSS region transcription start site region 153803
Tssr151776 18 68227838 to 68227880 42 + TSS region transcription start site region 151776
Tssr151777 18 68227928 to 68227975 47 + TSS region transcription start site region 151777
Tssr151778 18 68227987 to 68228002 15 + TSS region transcription start site region 151778
Tssr151779 18 68228035 to 68228048 13 + TSS region transcription start site region 151779
Tssr151780 18 68228055 to 68228087 32 + TSS region transcription start site region 151780
Tssr153804 18 68231080 to 68231094 14 - TSS region transcription start site region 153804