Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:67356359-67926378

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cidea 18 67343564 to 67367794 24230 + protein coding gene cell death-inducing DNA fragmentation factor, alpha subunit-like effector A
Tssr151737 18 67363774 to 67363776 2 + TSS region transcription start site region 151737
Cpgi10174 18 67390115 to 67391699 1584 CpG island CpG island 10174
Tssr151738 18 67390514 to 67390527 13 + TSS region transcription start site region 151738
Tssr151739 18 67390666 to 67390691 25 + TSS region transcription start site region 151739
Tssr151740 18 67390700 to 67390724 24 + TSS region transcription start site region 151740
Tubb6 18 67390731 to 67402749 12018 + protein coding gene tubulin, beta 6 class V
Cpgi10175 18 67401306 to 67402185 879 CpG island CpG island 10175
Tssr153769 18 67401594 to 67401603 9 - TSS region transcription start site region 153769
Tssr151741 18 67401700 to 67401721 21 + TSS region transcription start site region 151741
Tssr151742 18 67401731 to 67401748 17 + TSS region transcription start site region 151742
Tssr151743 18 67401832 to 67401852 20 + TSS region transcription start site region 151743
Tssr151744 18 67401857 to 67401869 12 + TSS region transcription start site region 151744
Afg3l2 18 67404760 to 67449136 44376 - protein coding gene AFG3-like AAA ATPase 2
Tssr153770 18 67439445 to 67439455 10 - TSS region transcription start site region 153770
Cpgi10176 18 67448414 to 67449591 1177 CpG island CpG island 10176
Tssr153771 18 67449083 to 67449205 122 - TSS region transcription start site region 153771
Gm46621 18 67462234 to 67464438 2204 - lncRNA gene predicted gene, 46621
Gm24900 18 67462342 to 67462475 133 + snoRNA gene predicted gene, 24900
Cpgi10177 18 67464247 to 67465498 1251 CpG island CpG island 10177
Prelid3a 18 67464849 to 67480581 15732 + protein coding gene PRELI domain containing 3A
Tssr151745 18 67464860 to 67464922 62 + TSS region transcription start site region 151745
Tssr5360 18 67470464 to 67470466 2 + TSS region transcription start site region 5360
Cpgi10178 18 67472825 to 67473133 308 CpG island CpG island 10178
Spire1 18 67488209 to 67610790 122581 - protein coding gene spire type actin nucleation factor 1
Tssr153772 18 67489416 to 67489421 5 - TSS region transcription start site region 153772
Tssr153773 18 67502597 to 67502601 4 - TSS region transcription start site region 153773
Tssr153774 18 67508586 to 67508589 3 - TSS region transcription start site region 153774
Tssr153775 18 67549244 to 67549269 25 - TSS region transcription start site region 153775
Tssr153776 18 67555309 to 67555315 6 - TSS region transcription start site region 153776
Gm17669 18 67562387 to 67562851 464 + protein coding gene predicted gene, 17669
Tssr153777 18 67601414 to 67601421 7 - TSS region transcription start site region 153777
Cpgi10179 18 67610116 to 67611324 1208 CpG island CpG island 10179
Tssr153778 18 67610733 to 67610734 1 - TSS region transcription start site region 153778
Tssr153779 18 67610761 to 67610770 9 - TSS region transcription start site region 153779
Tssr5361 18 67610784 to 67610800 16 - TSS region transcription start site region 5361
Tssr153780 18 67610802 to 67610808 6 - TSS region transcription start site region 153780
Tssr153781 18 67610822 to 67610852 30 - TSS region transcription start site region 153781
Tssr153782 18 67610858 to 67610915 57 - TSS region transcription start site region 153782
Cep76 18 67617397 to 67641336 23939 - protein coding gene centrosomal protein 76
Tssr153783 18 67631659 to 67631663 4 - TSS region transcription start site region 153783
Cpgi10180 18 67640547 to 67641992 1445 CpG island CpG island 10180
Tssr153784 18 67641257 to 67641284 27 - TSS region transcription start site region 153784
Tssr153785 18 67641307 to 67641325 18 - TSS region transcription start site region 153785
Tssr153786 18 67641329 to 67641349 20 - TSS region transcription start site region 153786
Tssr153787 18 67641359 to 67641378 19 - TSS region transcription start site region 153787
Tssr151746 18 67641562 to 67641586 24 + TSS region transcription start site region 151746
Tssr151747 18 67641589 to 67641630 41 + TSS region transcription start site region 151747
Psmg2 18 67641599 to 67654162 12563 + protein coding gene proteasome (prosome, macropain) assembly chaperone 2
Tssr151748 18 67641631 to 67641642 11 + TSS region transcription start site region 151748
Ptpn2 18 67665511 to 67724595 59084 - protein coding gene protein tyrosine phosphatase, non-receptor type 2
Tssr151749 18 67668289 to 67668314 25 + TSS region transcription start site region 151749
Tssr153788 18 67669222 to 67669228 6 - TSS region transcription start site region 153788
Tssr153789 18 67675757 to 67675769 12 - TSS region transcription start site region 153789
Tssr153790 18 67675870 to 67675882 12 - TSS region transcription start site region 153790
Tssr153791 18 67677739 to 67677756 17 - TSS region transcription start site region 153791
Tssr153792 18 67677777 to 67677814 37 - TSS region transcription start site region 153792
Tssr153793 18 67680874 to 67680906 32 - TSS region transcription start site region 153793
Tssr151750 18 67700636 to 67700643 7 + TSS region transcription start site region 151750
Tssr153794 18 67718675 to 67718713 38 - TSS region transcription start site region 153794
Cpgi10181 18 67723686 to 67724806 1120 CpG island CpG island 10181
Tssr153795 18 67724286 to 67724307 21 - TSS region transcription start site region 153795
Tssr153796 18 67724526 to 67724559 33 - TSS region transcription start site region 153796
Tssr153797 18 67724560 to 67724599 39 - TSS region transcription start site region 153797
Gm46626 18 67761711 to 67768659 6948 - lncRNA gene predicted gene, 46626
Gm26910 18 67773712 to 67774857 1145 - lincRNA gene predicted gene, 26910
Cpgi10182 18 67774536 to 67775864 1328 CpG island CpG island 10182
Tssr153798 18 67774681 to 67774704 23 - TSS region transcription start site region 153798
Tssr153799 18 67774710 to 67774759 49 - TSS region transcription start site region 153799
Tssr151751 18 67774779 to 67774819 40 + TSS region transcription start site region 151751
Seh1l 18 67774876 to 67795461 20585 + protein coding gene SEH1-like (S. cerevisiae
Tssr151752 18 67774879 to 67774882 3 + TSS region transcription start site region 151752
Tssr151753 18 67774894 to 67774915 21 + TSS region transcription start site region 151753
Tssr151754 18 67774919 to 67774934 15 + TSS region transcription start site region 151754
Tssr151755 18 67774970 to 67774981 11 + TSS region transcription start site region 151755
Tssr151756 18 67774984 to 67775021 37 + TSS region transcription start site region 151756
Tssr153800 18 67775220 to 67775252 32 - TSS region transcription start site region 153800
Tssr151757 18 67775743 to 67775747 4 + TSS region transcription start site region 151757
4930549G23Rik 18 67776033 to 67799943 23910 - lncRNA gene RIKEN cDNA 4930549G23 gene
Tssr151758 18 67794449 to 67794462 13 + TSS region transcription start site region 151758
Tssr151759 18 67794577 to 67794589 12 + TSS region transcription start site region 151759
Cpgi10183 18 67799819 to 67800519 700 CpG island CpG island 10183
Tssr153801 18 67799924 to 67799975 51 - TSS region transcription start site region 153801
Tssr151760 18 67800101 to 67800147 46 + TSS region transcription start site region 151760
Cep192 18 67800107 to 67885170 85063 + protein coding gene centrosomal protein 192
Tssr151761 18 67800567 to 67800583 16 + TSS region transcription start site region 151761
Tssr151762 18 67815487 to 67815501 14 + TSS region transcription start site region 151762
D18Mit100 18 67900644 to 67900770 126 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 100
Gm8887 18 67907627 to 67908925 1298 + pseudogene predicted gene 8887
Modvl5 18 67919085 to 67919240 155 QTL modifier of vacuolated lens 5
D18Mit50 18 67919085 to 67919240 155 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 50
Tgq1 18 67919085 to 67919240 155 QTL triglyceride QTL 1