Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:66454671-67264984

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mom3 18 13896966 to 66965891 53068925 QTL modifier of Min 3
Sstapa2 18 56661558 to 66819414 10157856 QTL suseptibility to Staphylococcus aureus infection 2
Cpgi10160 18 66458194 to 66459389 1195 CpG island CpG island 10160
Tssr151705 18 66458587 to 66458604 17 + TSS region transcription start site region 151705
Pmaip1 18 66458604 to 66465550 6946 + protein coding gene phorbol-12-myristate-13-acetate-induced protein 1
Cpgi10161 18 66460854 to 66461124 270 CpG island CpG island 10161
Cpgi10162 18 66470804 to 66471118 314 CpG island CpG island 10162
Tssr151706 18 66470842 to 66470847 5 + TSS region transcription start site region 151706
Tssr153741 18 66471514 to 66471521 7 - TSS region transcription start site region 153741
Tssr151707 18 66475623 to 66475642 19 + TSS region transcription start site region 151707
Tssr153742 18 66476555 to 66476561 6 - TSS region transcription start site region 153742
Tssr153743 18 66504059 to 66504062 3 - TSS region transcription start site region 153743
Tssr151708 18 66504170 to 66504187 17 + TSS region transcription start site region 151708
Gm9926 18 66504178 to 66511737 7559 + lncRNA gene predicted gene 9926
Tssr151709 18 66509872 to 66509877 5 + TSS region transcription start site region 151709
Cpgi10163 18 66510410 to 66510621 211 CpG island CpG island 10163
D18Mit81 18 66541078 to 66541225 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 81
Ett1 18 66541078 to 68535397 1994319 QTL experimentally induced testicular teratoma 1
Tssr151710 18 66548891 to 66548897 6 + TSS region transcription start site region 151710
Gm24679 18 66549935 to 66550045 110 - snoRNA gene predicted gene, 24679
Gm36092 18 66561615 to 66561939 324 - pseudogene predicted gene, 36092
Gm41762 18 66633905 to 66657138 23233 + lncRNA gene predicted gene, 41762
Gm30190 18 66673014 to 66674515 1501 - lncRNA gene predicted gene, 30190
Tssr153744 18 66674499 to 66674512 13 - TSS region transcription start site region 153744
Gm22219 18 66676361 to 66676679 318 + lncRNA gene predicted gene, 22219
D18Mit184 18 66819243 to 66819414 171 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 184
Mc4r 18 66857715 to 66860472 2757 - protein coding gene melanocortin 4 receptor
Cpgi10164 18 66859671 to 66859984 313 CpG island CpG island 10164
Tssr153745 18 66860458 to 66860485 27 - TSS region transcription start site region 153745
Tssr153746 18 66860497 to 66860508 11 - TSS region transcription start site region 153746
Gm19784 18 66924762 to 66949961 25199 - lncRNA gene predicted gene, 19784
D18Mit209 18 66965767 to 66965891 124 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 209
Cpgi10165 18 66968951 to 66969223 272 CpG island CpG island 10165
Tssr151711 18 66975044 to 66975056 12 + TSS region transcription start site region 151711
Tssr153747 18 67034503 to 67034507 4 - TSS region transcription start site region 153747
Tssr153748 18 67045932 to 67045944 12 - TSS region transcription start site region 153748
Tssr153749 18 67048189 to 67048192 3 - TSS region transcription start site region 153749
Tssr153750 18 67057178 to 67057182 4 - TSS region transcription start site region 153750
Tssr153751 18 67057231 to 67057235 4 - TSS region transcription start site region 153751
Tssr153752 18 67061329 to 67061335 6 - TSS region transcription start site region 153752
Tssr153753 18 67062997 to 67063001 4 - TSS region transcription start site region 153753
Tssr5358 18 67065251 to 67065254 3 - TSS region transcription start site region 5358
Tssr153754 18 67066453 to 67066468 15 - TSS region transcription start site region 153754
Tssr153755 18 67066473 to 67066485 12 - TSS region transcription start site region 153755
Tssr151712 18 67066577 to 67066593 16 + TSS region transcription start site region 151712
Tssr151713 18 67066608 to 67066615 7 + TSS region transcription start site region 151713
Tssr151714 18 67066627 to 67066637 10 + TSS region transcription start site region 151714
Tssr151715 18 67072968 to 67072970 2 + TSS region transcription start site region 151715
Cpgi10166 18 67087966 to 67089165 1199 CpG island CpG island 10166
Tssr151716 18 67088232 to 67088248 16 + TSS region transcription start site region 151716
Tssr151717 18 67088287 to 67088345 58 + TSS region transcription start site region 151717
Gnal 18 67088336 to 67226792 138456 + protein coding gene guanine nucleotide binding protein, alpha stimulating, olfactory type
Tssr151718 18 67088348 to 67088359 11 + TSS region transcription start site region 151718
Cpgi10167 18 67089614 to 67089806 192 CpG island CpG island 10167
Cpgi10168 18 67132889 to 67134286 1397 CpG island CpG island 10168
Tssr151719 18 67133078 to 67133086 8 + TSS region transcription start site region 151719
Tssr151720 18 67133097 to 67133109 12 + TSS region transcription start site region 151720
Tssr151721 18 67133478 to 67133496 18 + TSS region transcription start site region 151721
Tssr151722 18 67133498 to 67133535 37 + TSS region transcription start site region 151722
Tssr151723 18 67133547 to 67133585 38 + TSS region transcription start site region 151723
Tssr151724 18 67133713 to 67133734 21 + TSS region transcription start site region 151724
Tssr153756 18 67134071 to 67134082 11 - TSS region transcription start site region 153756
Tssr153757 18 67134117 to 67134126 9 - TSS region transcription start site region 153757
Tssr153758 18 67134165 to 67134189 24 - TSS region transcription start site region 153758
Tssr153759 18 67134194 to 67134203 9 - TSS region transcription start site region 153759
Gm23512 18 67174885 to 67174991 106 - snRNA gene predicted gene, 23512
Cpgi10169 18 67205130 to 67206190 1060 CpG island CpG island 10169
Chmp1b 18 67205359 to 67207887 2528 + protein coding gene charged multivesicular body protein 1B
Tssr151725 18 67205369 to 67205426 57 + TSS region transcription start site region 151725
Tssr151726 18 67205433 to 67205452 19 + TSS region transcription start site region 151726
Mppe1 18 67225530 to 67245830 20300 - protein coding gene metallophosphoesterase 1
Tssr153760 18 67228875 to 67228878 3 - TSS region transcription start site region 153760
Tssr153761 18 67243069 to 67243073 4 - TSS region transcription start site region 153761
Tssr151727 18 67243489 to 67243513 24 + TSS region transcription start site region 151727
Tssr153762 18 67244389 to 67244405 16 - TSS region transcription start site region 153762
Cpgi10170 18 67245080 to 67245845 765 CpG island CpG island 10170
Tssr153763 18 67245448 to 67245489 41 - TSS region transcription start site region 153763
Tssr153764 18 67245600 to 67245690 90 - TSS region transcription start site region 153764
Tssr153765 18 67245818 to 67245842 24 - TSS region transcription start site region 153765
Tssr153766 18 67248804 to 67248829 25 - TSS region transcription start site region 153766
Tssr5359 18 67252342 to 67252346 4 + TSS region transcription start site region 5359