Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:66278014-67069515

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mom3 18 13896966 to 66965891 53068925 QTL modifier of Min 3
Sstapa2 18 56661558 to 66819414 10157856 QTL suseptibility to Staphylococcus aureus infection 2
Ccbe1 18 66056855 to 66291838 234983 - protein coding gene collagen and calcium binding EGF domains 1
Cpgi10158 18 66291039 to 66292168 1129 CpG island CpG island 10158
Gm15958 18 66291274 to 66319607 28333 + unclassified non-coding RNA gene predicted gene 15958
Tssr153738 18 66291770 to 66291840 70 - TSS region transcription start site region 153738
Tssr153739 18 66292082 to 66292097 15 - TSS region transcription start site region 153739
Cpgi10159 18 66292392 to 66292587 195 CpG island CpG island 10159
Tssr153740 18 66292648 to 66292667 19 - TSS region transcription start site region 153740
Gm20294 18 66417143 to 66418131 988 + pseudogene predicted gene, 20294
Cpgi10160 18 66458194 to 66459389 1195 CpG island CpG island 10160
Tssr151705 18 66458587 to 66458604 17 + TSS region transcription start site region 151705
Pmaip1 18 66458604 to 66465550 6946 + protein coding gene phorbol-12-myristate-13-acetate-induced protein 1
Cpgi10161 18 66460854 to 66461124 270 CpG island CpG island 10161
Cpgi10162 18 66470804 to 66471118 314 CpG island CpG island 10162
Tssr151706 18 66470842 to 66470847 5 + TSS region transcription start site region 151706
Tssr153741 18 66471514 to 66471521 7 - TSS region transcription start site region 153741
Tssr151707 18 66475623 to 66475642 19 + TSS region transcription start site region 151707
Tssr153742 18 66476555 to 66476561 6 - TSS region transcription start site region 153742
Tssr153743 18 66504059 to 66504062 3 - TSS region transcription start site region 153743
Tssr151708 18 66504170 to 66504187 17 + TSS region transcription start site region 151708
Gm9926 18 66504178 to 66511737 7559 + lncRNA gene predicted gene 9926
Tssr151709 18 66509872 to 66509877 5 + TSS region transcription start site region 151709
Cpgi10163 18 66510410 to 66510621 211 CpG island CpG island 10163
D18Mit81 18 66541078 to 66541225 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 81
Ett1 18 66541078 to 68535397 1994319 QTL experimentally induced testicular teratoma 1
Tssr151710 18 66548891 to 66548897 6 + TSS region transcription start site region 151710
Gm24679 18 66549935 to 66550045 110 - snoRNA gene predicted gene, 24679
Gm36092 18 66561615 to 66561939 324 - pseudogene predicted gene, 36092
Gm41762 18 66633905 to 66657138 23233 + lncRNA gene predicted gene, 41762
Gm30190 18 66673014 to 66674515 1501 - lncRNA gene predicted gene, 30190
Tssr153744 18 66674499 to 66674512 13 - TSS region transcription start site region 153744
Gm22219 18 66676361 to 66676679 318 + lncRNA gene predicted gene, 22219
D18Mit184 18 66819243 to 66819414 171 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 184
Mc4r 18 66857715 to 66860472 2757 - protein coding gene melanocortin 4 receptor
Cpgi10164 18 66859671 to 66859984 313 CpG island CpG island 10164
Tssr153745 18 66860458 to 66860485 27 - TSS region transcription start site region 153745
Tssr153746 18 66860497 to 66860508 11 - TSS region transcription start site region 153746
Gm19784 18 66924762 to 66949961 25199 - lncRNA gene predicted gene, 19784
D18Mit209 18 66965767 to 66965891 124 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 209
Cpgi10165 18 66968951 to 66969223 272 CpG island CpG island 10165
Tssr151711 18 66975044 to 66975056 12 + TSS region transcription start site region 151711
Tssr153747 18 67034503 to 67034507 4 - TSS region transcription start site region 153747
Tssr153748 18 67045932 to 67045944 12 - TSS region transcription start site region 153748
Tssr153749 18 67048189 to 67048192 3 - TSS region transcription start site region 153749
Tssr153750 18 67057178 to 67057182 4 - TSS region transcription start site region 153750
Tssr153751 18 67057231 to 67057235 4 - TSS region transcription start site region 153751
Tssr153752 18 67061329 to 67061335 6 - TSS region transcription start site region 153752
Tssr153753 18 67062997 to 67063001 4 - TSS region transcription start site region 153753
Tssr5358 18 67065251 to 67065254 3 - TSS region transcription start site region 5358
Tssr153754 18 67066453 to 67066468 15 - TSS region transcription start site region 153754
Tssr153755 18 67066473 to 67066485 12 - TSS region transcription start site region 153755
Tssr151712 18 67066577 to 67066593 16 + TSS region transcription start site region 151712
Tssr151713 18 67066608 to 67066615 7 + TSS region transcription start site region 151713
Tssr151714 18 67066627 to 67066637 10 + TSS region transcription start site region 151714