Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:65695842-67245847

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143 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mom3 18 13896966 to 66965891 53068925 QTL modifier of Min 3
Sstapa2 18 56661558 to 66819414 10157856 QTL suseptibility to Staphylococcus aureus infection 2
Flal2 18 64000000 to 66000000 2000000 QTL fatty liver accumulation QTL 2, females only
Tssr153712 18 65697608 to 65697624 16 - TSS region transcription start site region 153712
Tssr151695 18 65697984 to 65698004 20 + TSS region transcription start site region 151695
Tssr5355 18 65698134 to 65698156 22 + TSS region transcription start site region 5355
Tssr151696 18 65698253 to 65698277 24 + TSS region transcription start site region 151696
Oacyl 18 65698268 to 65751601 53333 + protein coding gene O-acyltransferase like
Tssr151697 18 65698327 to 65698336 9 + TSS region transcription start site region 151697
Tssr153713 18 65698488 to 65698511 23 - TSS region transcription start site region 153713
Tssr153714 18 65767086 to 65767093 7 - TSS region transcription start site region 153714
Cpgi10152 18 65800117 to 65801011 894 CpG island CpG island 10152
Tssr151698 18 65800543 to 65800599 56 + TSS region transcription start site region 151698
Sec11c 18 65800578 to 65817660 17082 + protein coding gene SEC11 homolog C, signal peptidase complex subunit
Tssr151699 18 65800607 to 65800618 11 + TSS region transcription start site region 151699
Tssr151700 18 65801443 to 65801469 26 + TSS region transcription start site region 151700
Tssr151701 18 65803595 to 65803599 4 + TSS region transcription start site region 151701
Tssr151702 18 65806126 to 65806137 11 + TSS region transcription start site region 151702
Tssr151703 18 65814633 to 65814655 22 + TSS region transcription start site region 151703
Gm30094 18 65863340 to 65894755 31415 - lncRNA gene predicted gene, 30094
Grp 18 65872820 to 65886579 13759 + protein coding gene gastrin releasing peptide
Cpgi10153 18 65873233 to 65873958 725 CpG island CpG island 10153
Tssr151704 18 65873478 to 65873495 17 + TSS region transcription start site region 151704
Tssr153715 18 65873859 to 65873863 4 - TSS region transcription start site region 153715
Tssr153716 18 65873872 to 65873885 13 - TSS region transcription start site region 153716
Tssr153717 18 65890748 to 65890762 14 - TSS region transcription start site region 153717
Gm25150 18 65907163 to 65907222 59 - snRNA gene predicted gene, 25150
Cpgi10154 18 65934610 to 65935600 990 CpG island CpG island 10154
Rax 18 65934639 to 65939089 4450 - protein coding gene retina and anterior neural fold homeobox
Tssr153718 18 65935945 to 65935978 33 - TSS region transcription start site region 153718
Raxos1 18 65937538 to 65940447 2909 + lincRNA gene retina and anterior neural fold homeobox, opposite strand 1
Cpgi10155 18 65937660 to 65939139 1479 CpG island CpG island 10155
Tssr153719 18 65939019 to 65939030 11 - TSS region transcription start site region 153719
Tssr153720 18 65939048 to 65939088 40 - TSS region transcription start site region 153720
Tssr153721 18 65939098 to 65939103 5 - TSS region transcription start site region 153721
Tssr153722 18 65939797 to 65939807 10 - TSS region transcription start site region 153722
Cplx4 18 65955727 to 65970178 14451 - protein coding gene complexin 4
Tssr153723 18 65970084 to 65970089 5 - TSS region transcription start site region 153723
Tssr153724 18 65970184 to 65970201 17 - TSS region transcription start site region 153724
Tssr153725 18 65970203 to 65970222 19 - TSS region transcription start site region 153725
Tssr5356 18 65970227 to 65970232 5 - TSS region transcription start site region 5356
Tssr153726 18 65970236 to 65970247 11 - TSS region transcription start site region 153726
Lman1 18 65980739 to 66002635 21896 - protein coding gene lectin, mannose-binding, 1
Cpgi10156 18 66002067 to 66002930 863 CpG island CpG island 10156
Tssr153727 18 66002612 to 66002637 25 - TSS region transcription start site region 153727
Tssr153728 18 66006088 to 66006089 1 - TSS region transcription start site region 153728
Tssr153729 18 66019959 to 66019991 32 - TSS region transcription start site region 153729
Tssr153730 18 66022490 to 66022505 15 - TSS region transcription start site region 153730
Tssr153731 18 66022582 to 66022600 18 - TSS region transcription start site region 153731
Ccbe1 18 66056855 to 66291838 234983 - protein coding gene collagen and calcium binding EGF domains 1
Tssr153732 18 66059502 to 66059517 15 - TSS region transcription start site region 153732
Tssr5357 18 66059547 to 66059558 11 - TSS region transcription start site region 5357
Tssr153733 18 66059561 to 66059592 31 - TSS region transcription start site region 153733
Cpgi10157 18 66084721 to 66085260 539 CpG island CpG island 10157
Tssr153734 18 66153399 to 66153407 8 - TSS region transcription start site region 153734
Tssr153735 18 66153416 to 66153427 11 - TSS region transcription start site region 153735
Tssr153736 18 66211976 to 66211981 5 - TSS region transcription start site region 153736
Tssr153737 18 66212350 to 66212354 4 - TSS region transcription start site region 153737
Mir694 18 66219264 to 66219333 69 - miRNA gene microRNA 694
Cpgi10158 18 66291039 to 66292168 1129 CpG island CpG island 10158
Gm15958 18 66291274 to 66319607 28333 + unclassified non-coding RNA gene predicted gene 15958
Tssr153738 18 66291770 to 66291840 70 - TSS region transcription start site region 153738
Tssr153739 18 66292082 to 66292097 15 - TSS region transcription start site region 153739
Cpgi10159 18 66292392 to 66292587 195 CpG island CpG island 10159
Tssr153740 18 66292648 to 66292667 19 - TSS region transcription start site region 153740
Gm20294 18 66417143 to 66418131 988 + pseudogene predicted gene, 20294
Cpgi10160 18 66458194 to 66459389 1195 CpG island CpG island 10160
Tssr151705 18 66458587 to 66458604 17 + TSS region transcription start site region 151705
Pmaip1 18 66458604 to 66465550 6946 + protein coding gene phorbol-12-myristate-13-acetate-induced protein 1
Cpgi10161 18 66460854 to 66461124 270 CpG island CpG island 10161
Cpgi10162 18 66470804 to 66471118 314 CpG island CpG island 10162
Tssr151706 18 66470842 to 66470847 5 + TSS region transcription start site region 151706
Tssr153741 18 66471514 to 66471521 7 - TSS region transcription start site region 153741
Tssr151707 18 66475623 to 66475642 19 + TSS region transcription start site region 151707
Tssr153742 18 66476555 to 66476561 6 - TSS region transcription start site region 153742
Tssr153743 18 66504059 to 66504062 3 - TSS region transcription start site region 153743
Tssr151708 18 66504170 to 66504187 17 + TSS region transcription start site region 151708
Gm9926 18 66504178 to 66511737 7559 + lncRNA gene predicted gene 9926
Tssr151709 18 66509872 to 66509877 5 + TSS region transcription start site region 151709
Cpgi10163 18 66510410 to 66510621 211 CpG island CpG island 10163
D18Mit81 18 66541078 to 66541225 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 81
Ett1 18 66541078 to 68535397 1994319 QTL experimentally induced testicular teratoma 1
Tssr151710 18 66548891 to 66548897 6 + TSS region transcription start site region 151710
Gm24679 18 66549935 to 66550045 110 - snoRNA gene predicted gene, 24679
Gm36092 18 66561615 to 66561939 324 - pseudogene predicted gene, 36092
Gm41762 18 66633905 to 66657138 23233 + lncRNA gene predicted gene, 41762
Gm30190 18 66673014 to 66674515 1501 - lncRNA gene predicted gene, 30190
Tssr153744 18 66674499 to 66674512 13 - TSS region transcription start site region 153744
Gm22219 18 66676361 to 66676679 318 + lncRNA gene predicted gene, 22219
D18Mit184 18 66819243 to 66819414 171 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 184
Mc4r 18 66857715 to 66860472 2757 - protein coding gene melanocortin 4 receptor
Cpgi10164 18 66859671 to 66859984 313 CpG island CpG island 10164
Tssr153745 18 66860458 to 66860485 27 - TSS region transcription start site region 153745
Tssr153746 18 66860497 to 66860508 11 - TSS region transcription start site region 153746
Gm19784 18 66924762 to 66949961 25199 - lncRNA gene predicted gene, 19784
D18Mit209 18 66965767 to 66965891 124 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 209
Cpgi10165 18 66968951 to 66969223 272 CpG island CpG island 10165
Tssr151711 18 66975044 to 66975056 12 + TSS region transcription start site region 151711
Tssr153747 18 67034503 to 67034507 4 - TSS region transcription start site region 153747
Tssr153748 18 67045932 to 67045944 12 - TSS region transcription start site region 153748
Tssr153749 18 67048189 to 67048192 3 - TSS region transcription start site region 153749
Tssr153750 18 67057178 to 67057182 4 - TSS region transcription start site region 153750
Tssr153751 18 67057231 to 67057235 4 - TSS region transcription start site region 153751
Tssr153752 18 67061329 to 67061335 6 - TSS region transcription start site region 153752
Tssr153753 18 67062997 to 67063001 4 - TSS region transcription start site region 153753
Tssr5358 18 67065251 to 67065254 3 - TSS region transcription start site region 5358
Tssr153754 18 67066453 to 67066468 15 - TSS region transcription start site region 153754
Tssr153755 18 67066473 to 67066485 12 - TSS region transcription start site region 153755
Tssr151712 18 67066577 to 67066593 16 + TSS region transcription start site region 151712
Tssr151713 18 67066608 to 67066615 7 + TSS region transcription start site region 151713
Tssr151714 18 67066627 to 67066637 10 + TSS region transcription start site region 151714
Tssr151715 18 67072968 to 67072970 2 + TSS region transcription start site region 151715
Cpgi10166 18 67087966 to 67089165 1199 CpG island CpG island 10166
Tssr151716 18 67088232 to 67088248 16 + TSS region transcription start site region 151716
Tssr151717 18 67088287 to 67088345 58 + TSS region transcription start site region 151717
Gnal 18 67088336 to 67226792 138456 + protein coding gene guanine nucleotide binding protein, alpha stimulating, olfactory type
Tssr151718 18 67088348 to 67088359 11 + TSS region transcription start site region 151718
Cpgi10167 18 67089614 to 67089806 192 CpG island CpG island 10167
Cpgi10168 18 67132889 to 67134286 1397 CpG island CpG island 10168
Tssr151719 18 67133078 to 67133086 8 + TSS region transcription start site region 151719
Tssr151720 18 67133097 to 67133109 12 + TSS region transcription start site region 151720
Tssr151721 18 67133478 to 67133496 18 + TSS region transcription start site region 151721
Tssr151722 18 67133498 to 67133535 37 + TSS region transcription start site region 151722
Tssr151723 18 67133547 to 67133585 38 + TSS region transcription start site region 151723
Tssr151724 18 67133713 to 67133734 21 + TSS region transcription start site region 151724
Tssr153756 18 67134071 to 67134082 11 - TSS region transcription start site region 153756
Tssr153757 18 67134117 to 67134126 9 - TSS region transcription start site region 153757
Tssr153758 18 67134165 to 67134189 24 - TSS region transcription start site region 153758
Tssr153759 18 67134194 to 67134203 9 - TSS region transcription start site region 153759
Gm23512 18 67174885 to 67174991 106 - snRNA gene predicted gene, 23512
Cpgi10169 18 67205130 to 67206190 1060 CpG island CpG island 10169
Chmp1b 18 67205359 to 67207887 2528 + protein coding gene charged multivesicular body protein 1B
Tssr151725 18 67205369 to 67205426 57 + TSS region transcription start site region 151725
Tssr151726 18 67205433 to 67205452 19 + TSS region transcription start site region 151726
Mppe1 18 67225530 to 67245830 20300 - protein coding gene metallophosphoesterase 1
Tssr153760 18 67228875 to 67228878 3 - TSS region transcription start site region 153760
Tssr153761 18 67243069 to 67243073 4 - TSS region transcription start site region 153761
Tssr151727 18 67243489 to 67243513 24 + TSS region transcription start site region 151727
Tssr153762 18 67244389 to 67244405 16 - TSS region transcription start site region 153762
Cpgi10170 18 67245080 to 67245845 765 CpG island CpG island 10170
Tssr153763 18 67245448 to 67245489 41 - TSS region transcription start site region 153763
Tssr153764 18 67245600 to 67245690 90 - TSS region transcription start site region 153764
Tssr153765 18 67245818 to 67245842 24 - TSS region transcription start site region 153765