Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:65458134-65938156

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Malt1 18 65430962 to 65478823 47861 + protein coding gene MALT1 paracaspase
Tssr151656 18 65458158 to 65458179 21 + TSS region transcription start site region 151656
Tssr151657 18 65458367 to 65458380 13 + TSS region transcription start site region 151657
Tssr5354 18 65459799 to 65459810 11 + TSS region transcription start site region 5354
Tssr151658 18 65461016 to 65461030 14 + TSS region transcription start site region 151658
Tssr151659 18 65461108 to 65461119 11 + TSS region transcription start site region 151659
Tssr151660 18 65462749 to 65462760 11 + TSS region transcription start site region 151660
Tssr151661 18 65462912 to 65462917 5 + TSS region transcription start site region 151661
Tssr151662 18 65463274 to 65463312 38 + TSS region transcription start site region 151662
Tssr151663 18 65464115 to 65464119 4 + TSS region transcription start site region 151663
Tssr151664 18 65465943 to 65465970 27 + TSS region transcription start site region 151664
Tssr151665 18 65466637 to 65466654 17 + TSS region transcription start site region 151665
Tssr151666 18 65470476 to 65470492 16 + TSS region transcription start site region 151666
Tssr151667 18 65471577 to 65471588 11 + TSS region transcription start site region 151667
Tssr151668 18 65472675 to 65472692 17 + TSS region transcription start site region 151668
Tssr151669 18 65473032 to 65473047 15 + TSS region transcription start site region 151669
Tssr151670 18 65476186 to 65476201 15 + TSS region transcription start site region 151670
Tssr151671 18 65476305 to 65476335 30 + TSS region transcription start site region 151671
Tssr153706 18 65476367 to 65476383 16 - TSS region transcription start site region 153706
Tssr151672 18 65476494 to 65476509 15 + TSS region transcription start site region 151672
Tssr151673 18 65476517 to 65476530 13 + TSS region transcription start site region 151673
Tssr151674 18 65476892 to 65476905 13 + TSS region transcription start site region 151674
Tssr151675 18 65477099 to 65477106 7 + TSS region transcription start site region 151675
Tssr151676 18 65478475 to 65478505 30 + TSS region transcription start site region 151676
Tssr151677 18 65482056 to 65482060 4 + TSS region transcription start site region 151677
D18Mit107 18 65497282 to 65497549 267 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 107
Gm41758 18 65497510 to 65509541 12031 + lncRNA gene predicted gene, 41758
Tssr153707 18 65505490 to 65505537 47 - TSS region transcription start site region 153707
Gm30018 18 65522429 to 65532039 9610 - lncRNA gene predicted gene, 30018
Gm41759 18 65537417 to 65542437 5020 - lncRNA gene predicted gene, 41759
Gm41760 18 65543939 to 65579186 35247 - lncRNA gene predicted gene, 41760
Gm46625 18 65552881 to 65556975 4094 + lncRNA gene predicted gene, 46625
D18Ertd155e 18 65562973 to 65563177 204 DNA segment DNA segment, Chr 18, ERATO Doi 155, expressed
Tssr153708 18 65565775 to 65565789 14 - TSS region transcription start site region 153708
Zfp532 18 65580230 to 65689443 109213 + protein coding gene zinc finger protein 532
Tssr151678 18 65580377 to 65580400 23 + TSS region transcription start site region 151678
Cpgi10151 18 65580387 to 65581783 1396 CpG island CpG island 10151
Tssr151679 18 65580756 to 65580798 42 + TSS region transcription start site region 151679
Tssr151680 18 65580800 to 65580817 17 + TSS region transcription start site region 151680
Tssr151681 18 65581704 to 65581761 57 + TSS region transcription start site region 151681
Tssr153709 18 65582158 to 65582186 28 - TSS region transcription start site region 153709
Tssr151682 18 65582257 to 65582275 18 + TSS region transcription start site region 151682
Tssr151683 18 65582281 to 65582310 29 + TSS region transcription start site region 151683
Tssr151684 18 65582348 to 65582365 17 + TSS region transcription start site region 151684
Tssr151685 18 65582390 to 65582399 9 + TSS region transcription start site region 151685
Tssr151686 18 65583182 to 65583194 12 + TSS region transcription start site region 151686
Tssr153710 18 65584144 to 65584162 18 - TSS region transcription start site region 153710
Tssr153711 18 65587049 to 65587082 33 - TSS region transcription start site region 153711
Tssr151687 18 65587462 to 65587476 14 + TSS region transcription start site region 151687
Tssr151688 18 65587484 to 65587497 13 + TSS region transcription start site region 151688
Tssr151689 18 65588111 to 65588128 17 + TSS region transcription start site region 151689
Tssr151690 18 65594184 to 65594186 2 + TSS region transcription start site region 151690
Gm37643 18 65603834 to 65605093 1259 + unclassified gene predicted gene, 37643
Tssr151691 18 65624033 to 65624071 38 + TSS region transcription start site region 151691
Tssr151692 18 65626848 to 65626854 6 + TSS region transcription start site region 151692
Tssr151693 18 65631743 to 65631747 4 + TSS region transcription start site region 151693
Tssr151694 18 65634820 to 65634824 4 + TSS region transcription start site region 151694
Gm18281 18 65638753 to 65644346 5593 + pseudogene predicted gene, 18281
D18Mit161 18 65677632 to 65677800 168 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 161
Tssr153712 18 65697608 to 65697624 16 - TSS region transcription start site region 153712
Tssr151695 18 65697984 to 65698004 20 + TSS region transcription start site region 151695
Tssr5355 18 65698134 to 65698156 22 + TSS region transcription start site region 5355
Tssr151696 18 65698253 to 65698277 24 + TSS region transcription start site region 151696
Oacyl 18 65698268 to 65751601 53333 + protein coding gene O-acyltransferase like
Tssr151697 18 65698327 to 65698336 9 + TSS region transcription start site region 151697
Tssr153713 18 65698488 to 65698511 23 - TSS region transcription start site region 153713
Tssr153714 18 65767086 to 65767093 7 - TSS region transcription start site region 153714
Cpgi10152 18 65800117 to 65801011 894 CpG island CpG island 10152
Tssr151698 18 65800543 to 65800599 56 + TSS region transcription start site region 151698
Sec11c 18 65800578 to 65817660 17082 + protein coding gene SEC11 homolog C, signal peptidase complex subunit
Tssr151699 18 65800607 to 65800618 11 + TSS region transcription start site region 151699
Tssr151700 18 65801443 to 65801469 26 + TSS region transcription start site region 151700
Tssr151701 18 65803595 to 65803599 4 + TSS region transcription start site region 151701
Tssr151702 18 65806126 to 65806137 11 + TSS region transcription start site region 151702
Tssr151703 18 65814633 to 65814655 22 + TSS region transcription start site region 151703
Gm30094 18 65863340 to 65894755 31415 - lncRNA gene predicted gene, 30094
Grp 18 65872820 to 65886579 13759 + protein coding gene gastrin releasing peptide
Cpgi10153 18 65873233 to 65873958 725 CpG island CpG island 10153
Tssr151704 18 65873478 to 65873495 17 + TSS region transcription start site region 151704
Tssr153715 18 65873859 to 65873863 4 - TSS region transcription start site region 153715
Tssr153716 18 65873872 to 65873885 13 - TSS region transcription start site region 153716
Tssr153717 18 65890748 to 65890762 14 - TSS region transcription start site region 153717
Gm25150 18 65907163 to 65907222 59 - snRNA gene predicted gene, 25150
Cpgi10154 18 65934610 to 65935600 990 CpG island CpG island 10154
Rax 18 65934639 to 65939089 4450 - protein coding gene retina and anterior neural fold homeobox
Tssr153718 18 65935945 to 65935978 33 - TSS region transcription start site region 153718
Raxos1 18 65937538 to 65940447 2909 + lincRNA gene retina and anterior neural fold homeobox, opposite strand 1
Cpgi10155 18 65937660 to 65939139 1479 CpG island CpG island 10155