Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:65443939-65679186

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Malt1 18 65430962 to 65478823 47861 + protein coding gene MALT1 paracaspase
Tssr151632 18 65444898 to 65444915 17 + TSS region transcription start site region 151632
Tssr151633 18 65445566 to 65445575 9 + TSS region transcription start site region 151633
Tssr151634 18 65446608 to 65446658 50 + TSS region transcription start site region 151634
Tssr151635 18 65447605 to 65447637 32 + TSS region transcription start site region 151635
Tssr151636 18 65447684 to 65447695 11 + TSS region transcription start site region 151636
Tssr151637 18 65448174 to 65448200 26 + TSS region transcription start site region 151637
Tssr151638 18 65448201 to 65448216 15 + TSS region transcription start site region 151638
Tssr151639 18 65448269 to 65448295 26 + TSS region transcription start site region 151639
Tssr151640 18 65449066 to 65449108 42 + TSS region transcription start site region 151640
Tssr151641 18 65449905 to 65449927 22 + TSS region transcription start site region 151641
Tssr151642 18 65449941 to 65449950 9 + TSS region transcription start site region 151642
Tssr151643 18 65450698 to 65450709 11 + TSS region transcription start site region 151643
Tssr151644 18 65453395 to 65453401 6 + TSS region transcription start site region 151644
Tssr151645 18 65453694 to 65453714 20 + TSS region transcription start site region 151645
Tssr151646 18 65453911 to 65453945 34 + TSS region transcription start site region 151646
Tssr151647 18 65453993 to 65454010 17 + TSS region transcription start site region 151647
Tssr151648 18 65454102 to 65454111 9 + TSS region transcription start site region 151648
Tssr151649 18 65454172 to 65454185 13 + TSS region transcription start site region 151649
Tssr151650 18 65454832 to 65454845 13 + TSS region transcription start site region 151650
Tssr151651 18 65455858 to 65455882 24 + TSS region transcription start site region 151651
Tssr151652 18 65455980 to 65455991 11 + TSS region transcription start site region 151652
Tssr151653 18 65456198 to 65456209 11 + TSS region transcription start site region 151653
Tssr151654 18 65456222 to 65456245 23 + TSS region transcription start site region 151654
Tssr151655 18 65456449 to 65456459 10 + TSS region transcription start site region 151655
Tssr151656 18 65458158 to 65458179 21 + TSS region transcription start site region 151656
Tssr151657 18 65458367 to 65458380 13 + TSS region transcription start site region 151657
Tssr5354 18 65459799 to 65459810 11 + TSS region transcription start site region 5354
Tssr151658 18 65461016 to 65461030 14 + TSS region transcription start site region 151658
Tssr151659 18 65461108 to 65461119 11 + TSS region transcription start site region 151659
Tssr151660 18 65462749 to 65462760 11 + TSS region transcription start site region 151660
Tssr151661 18 65462912 to 65462917 5 + TSS region transcription start site region 151661
Tssr151662 18 65463274 to 65463312 38 + TSS region transcription start site region 151662
Tssr151663 18 65464115 to 65464119 4 + TSS region transcription start site region 151663
Tssr151664 18 65465943 to 65465970 27 + TSS region transcription start site region 151664
Tssr151665 18 65466637 to 65466654 17 + TSS region transcription start site region 151665
Tssr151666 18 65470476 to 65470492 16 + TSS region transcription start site region 151666
Tssr151667 18 65471577 to 65471588 11 + TSS region transcription start site region 151667
Tssr151668 18 65472675 to 65472692 17 + TSS region transcription start site region 151668
Tssr151669 18 65473032 to 65473047 15 + TSS region transcription start site region 151669
Tssr151670 18 65476186 to 65476201 15 + TSS region transcription start site region 151670
Tssr151671 18 65476305 to 65476335 30 + TSS region transcription start site region 151671
Tssr153706 18 65476367 to 65476383 16 - TSS region transcription start site region 153706
Tssr151672 18 65476494 to 65476509 15 + TSS region transcription start site region 151672
Tssr151673 18 65476517 to 65476530 13 + TSS region transcription start site region 151673
Tssr151674 18 65476892 to 65476905 13 + TSS region transcription start site region 151674
Tssr151675 18 65477099 to 65477106 7 + TSS region transcription start site region 151675
Tssr151676 18 65478475 to 65478505 30 + TSS region transcription start site region 151676
Tssr151677 18 65482056 to 65482060 4 + TSS region transcription start site region 151677
D18Mit107 18 65497282 to 65497549 267 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 107
Gm41758 18 65497510 to 65509541 12031 + lncRNA gene predicted gene, 41758
Tssr153707 18 65505490 to 65505537 47 - TSS region transcription start site region 153707
Gm30018 18 65522429 to 65532039 9610 - lncRNA gene predicted gene, 30018
Gm41759 18 65537417 to 65542437 5020 - lncRNA gene predicted gene, 41759
Gm41760 18 65543939 to 65579186 35247 - lncRNA gene predicted gene, 41760
Gm46625 18 65552881 to 65556975 4094 + lncRNA gene predicted gene, 46625
D18Ertd155e 18 65562973 to 65563177 204 DNA segment DNA segment, Chr 18, ERATO Doi 155, expressed
Tssr153708 18 65565775 to 65565789 14 - TSS region transcription start site region 153708
Zfp532 18 65580230 to 65689443 109213 + protein coding gene zinc finger protein 532
Tssr151678 18 65580377 to 65580400 23 + TSS region transcription start site region 151678
Cpgi10151 18 65580387 to 65581783 1396 CpG island CpG island 10151
Tssr151679 18 65580756 to 65580798 42 + TSS region transcription start site region 151679
Tssr151680 18 65580800 to 65580817 17 + TSS region transcription start site region 151680
Tssr151681 18 65581704 to 65581761 57 + TSS region transcription start site region 151681
Tssr153709 18 65582158 to 65582186 28 - TSS region transcription start site region 153709
Tssr151682 18 65582257 to 65582275 18 + TSS region transcription start site region 151682
Tssr151683 18 65582281 to 65582310 29 + TSS region transcription start site region 151683
Tssr151684 18 65582348 to 65582365 17 + TSS region transcription start site region 151684
Tssr151685 18 65582390 to 65582399 9 + TSS region transcription start site region 151685
Tssr151686 18 65583182 to 65583194 12 + TSS region transcription start site region 151686
Tssr153710 18 65584144 to 65584162 18 - TSS region transcription start site region 153710
Tssr153711 18 65587049 to 65587082 33 - TSS region transcription start site region 153711
Tssr151687 18 65587462 to 65587476 14 + TSS region transcription start site region 151687
Tssr151688 18 65587484 to 65587497 13 + TSS region transcription start site region 151688
Tssr151689 18 65588111 to 65588128 17 + TSS region transcription start site region 151689
Tssr151690 18 65594184 to 65594186 2 + TSS region transcription start site region 151690
Gm37643 18 65603834 to 65605093 1259 + unclassified gene predicted gene, 37643
Tssr151691 18 65624033 to 65624071 38 + TSS region transcription start site region 151691
Tssr151692 18 65626848 to 65626854 6 + TSS region transcription start site region 151692
Tssr151693 18 65631743 to 65631747 4 + TSS region transcription start site region 151693
Tssr151694 18 65634820 to 65634824 4 + TSS region transcription start site region 151694
Gm18281 18 65638753 to 65644346 5593 + pseudogene predicted gene, 18281
D18Mit161 18 65677632 to 65677800 168 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 161