Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:65391274-67219607

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258 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mom3 18 13896966 to 66965891 53068925 QTL modifier of Min 3
Sstapa2 18 56661558 to 66819414 10157856 QTL suseptibility to Staphylococcus aureus infection 2
Flal2 18 64000000 to 66000000 2000000 QTL fatty liver accumulation QTL 2, females only
Alpk2 18 65265529 to 65393888 128359 - protein coding gene alpha-kinase 2
Tssr153699 18 65393698 to 65393709 11 - TSS region transcription start site region 153699
Tssr153700 18 65393844 to 65393922 78 - TSS region transcription start site region 153700
Tssr153701 18 65393954 to 65393963 9 - TSS region transcription start site region 153701
Tssr153702 18 65393980 to 65393991 11 - TSS region transcription start site region 153702
Tssr153703 18 65394008 to 65394021 13 - TSS region transcription start site region 153703
Tssr151602 18 65412828 to 65412830 2 + TSS region transcription start site region 151602
Tssr151603 18 65412903 to 65412910 7 + TSS region transcription start site region 151603
Tssr151604 18 65414987 to 65414994 7 + TSS region transcription start site region 151604
Tssr151605 18 65414996 to 65415008 12 + TSS region transcription start site region 151605
Tssr153704 18 65416391 to 65416407 16 - TSS region transcription start site region 153704
Gm46618 18 65418971 to 65419388 417 - pseudogene predicted gene, 46618
Gm22567 18 65427469 to 65427810 341 + unclassified non-coding RNA gene predicted gene, 22567
Tssr153705 18 65427807 to 65427809 2 - TSS region transcription start site region 153705
Tssr151606 18 65430108 to 65430111 3 + TSS region transcription start site region 151606
Cpgi10150 18 65430405 to 65431766 1361 CpG island CpG island 10150
Tssr151607 18 65430617 to 65430644 27 + TSS region transcription start site region 151607
Tssr151608 18 65430769 to 65430782 13 + TSS region transcription start site region 151608
Tssr151609 18 65430945 to 65430973 28 + TSS region transcription start site region 151609
Malt1 18 65430962 to 65478823 47861 + protein coding gene MALT1 paracaspase
Tssr151610 18 65430984 to 65431011 27 + TSS region transcription start site region 151610
Tssr151611 18 65431012 to 65431037 25 + TSS region transcription start site region 151611
Tssr151612 18 65431049 to 65431078 29 + TSS region transcription start site region 151612
Tssr151613 18 65431082 to 65431087 5 + TSS region transcription start site region 151613
Tssr151614 18 65431144 to 65431155 11 + TSS region transcription start site region 151614
Tssr151615 18 65432069 to 65432082 13 + TSS region transcription start site region 151615
Tssr151616 18 65434997 to 65435008 11 + TSS region transcription start site region 151616
Tssr151617 18 65435287 to 65435300 13 + TSS region transcription start site region 151617
Tssr151618 18 65436124 to 65436138 14 + TSS region transcription start site region 151618
Tssr151619 18 65437379 to 65437391 12 + TSS region transcription start site region 151619
Tssr151620 18 65437403 to 65437422 19 + TSS region transcription start site region 151620
Tssr151621 18 65438186 to 65438208 22 + TSS region transcription start site region 151621
Tssr151622 18 65438564 to 65438586 22 + TSS region transcription start site region 151622
Tssr151623 18 65438659 to 65438673 14 + TSS region transcription start site region 151623
Tssr151624 18 65438818 to 65438832 14 + TSS region transcription start site region 151624
Tssr151625 18 65439540 to 65439562 22 + TSS region transcription start site region 151625
Tssr151626 18 65441776 to 65441802 26 + TSS region transcription start site region 151626
Tssr151627 18 65442215 to 65442227 12 + TSS region transcription start site region 151627
Tssr151628 18 65442326 to 65442345 19 + TSS region transcription start site region 151628
Tssr151629 18 65442364 to 65442380 16 + TSS region transcription start site region 151629
Tssr151630 18 65442381 to 65442393 12 + TSS region transcription start site region 151630
Tssr151631 18 65442589 to 65442605 16 + TSS region transcription start site region 151631
Tssr151632 18 65444898 to 65444915 17 + TSS region transcription start site region 151632
Tssr151633 18 65445566 to 65445575 9 + TSS region transcription start site region 151633
Tssr151634 18 65446608 to 65446658 50 + TSS region transcription start site region 151634
Tssr151635 18 65447605 to 65447637 32 + TSS region transcription start site region 151635
Tssr151636 18 65447684 to 65447695 11 + TSS region transcription start site region 151636
Tssr151637 18 65448174 to 65448200 26 + TSS region transcription start site region 151637
Tssr151638 18 65448201 to 65448216 15 + TSS region transcription start site region 151638
Tssr151639 18 65448269 to 65448295 26 + TSS region transcription start site region 151639
Tssr151640 18 65449066 to 65449108 42 + TSS region transcription start site region 151640
Tssr151641 18 65449905 to 65449927 22 + TSS region transcription start site region 151641
Tssr151642 18 65449941 to 65449950 9 + TSS region transcription start site region 151642
Tssr151643 18 65450698 to 65450709 11 + TSS region transcription start site region 151643
Tssr151644 18 65453395 to 65453401 6 + TSS region transcription start site region 151644
Tssr151645 18 65453694 to 65453714 20 + TSS region transcription start site region 151645
Tssr151646 18 65453911 to 65453945 34 + TSS region transcription start site region 151646
Tssr151647 18 65453993 to 65454010 17 + TSS region transcription start site region 151647
Tssr151648 18 65454102 to 65454111 9 + TSS region transcription start site region 151648
Tssr151649 18 65454172 to 65454185 13 + TSS region transcription start site region 151649
Tssr151650 18 65454832 to 65454845 13 + TSS region transcription start site region 151650
Tssr151651 18 65455858 to 65455882 24 + TSS region transcription start site region 151651
Tssr151652 18 65455980 to 65455991 11 + TSS region transcription start site region 151652
Tssr151653 18 65456198 to 65456209 11 + TSS region transcription start site region 151653
Tssr151654 18 65456222 to 65456245 23 + TSS region transcription start site region 151654
Tssr151655 18 65456449 to 65456459 10 + TSS region transcription start site region 151655
Tssr151656 18 65458158 to 65458179 21 + TSS region transcription start site region 151656
Tssr151657 18 65458367 to 65458380 13 + TSS region transcription start site region 151657
Tssr5354 18 65459799 to 65459810 11 + TSS region transcription start site region 5354
Tssr151658 18 65461016 to 65461030 14 + TSS region transcription start site region 151658
Tssr151659 18 65461108 to 65461119 11 + TSS region transcription start site region 151659
Tssr151660 18 65462749 to 65462760 11 + TSS region transcription start site region 151660
Tssr151661 18 65462912 to 65462917 5 + TSS region transcription start site region 151661
Tssr151662 18 65463274 to 65463312 38 + TSS region transcription start site region 151662
Tssr151663 18 65464115 to 65464119 4 + TSS region transcription start site region 151663
Tssr151664 18 65465943 to 65465970 27 + TSS region transcription start site region 151664
Tssr151665 18 65466637 to 65466654 17 + TSS region transcription start site region 151665
Tssr151666 18 65470476 to 65470492 16 + TSS region transcription start site region 151666
Tssr151667 18 65471577 to 65471588 11 + TSS region transcription start site region 151667
Tssr151668 18 65472675 to 65472692 17 + TSS region transcription start site region 151668
Tssr151669 18 65473032 to 65473047 15 + TSS region transcription start site region 151669
Tssr151670 18 65476186 to 65476201 15 + TSS region transcription start site region 151670
Tssr151671 18 65476305 to 65476335 30 + TSS region transcription start site region 151671
Tssr153706 18 65476367 to 65476383 16 - TSS region transcription start site region 153706
Tssr151672 18 65476494 to 65476509 15 + TSS region transcription start site region 151672
Tssr151673 18 65476517 to 65476530 13 + TSS region transcription start site region 151673
Tssr151674 18 65476892 to 65476905 13 + TSS region transcription start site region 151674
Tssr151675 18 65477099 to 65477106 7 + TSS region transcription start site region 151675
Tssr151676 18 65478475 to 65478505 30 + TSS region transcription start site region 151676
Tssr151677 18 65482056 to 65482060 4 + TSS region transcription start site region 151677
D18Mit107 18 65497282 to 65497549 267 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 107
Gm41758 18 65497510 to 65509541 12031 + lncRNA gene predicted gene, 41758
Tssr153707 18 65505490 to 65505537 47 - TSS region transcription start site region 153707
Gm30018 18 65522429 to 65532039 9610 - lncRNA gene predicted gene, 30018
Gm41759 18 65537417 to 65542437 5020 - lncRNA gene predicted gene, 41759
Gm41760 18 65543939 to 65579186 35247 - lncRNA gene predicted gene, 41760
Gm46625 18 65552881 to 65556975 4094 + lncRNA gene predicted gene, 46625
D18Ertd155e 18 65562973 to 65563177 204 DNA segment DNA segment, Chr 18, ERATO Doi 155, expressed
Tssr153708 18 65565775 to 65565789 14 - TSS region transcription start site region 153708
Zfp532 18 65580230 to 65689443 109213 + protein coding gene zinc finger protein 532
Tssr151678 18 65580377 to 65580400 23 + TSS region transcription start site region 151678
Cpgi10151 18 65580387 to 65581783 1396 CpG island CpG island 10151
Tssr151679 18 65580756 to 65580798 42 + TSS region transcription start site region 151679
Tssr151680 18 65580800 to 65580817 17 + TSS region transcription start site region 151680
Tssr151681 18 65581704 to 65581761 57 + TSS region transcription start site region 151681
Tssr153709 18 65582158 to 65582186 28 - TSS region transcription start site region 153709
Tssr151682 18 65582257 to 65582275 18 + TSS region transcription start site region 151682
Tssr151683 18 65582281 to 65582310 29 + TSS region transcription start site region 151683
Tssr151684 18 65582348 to 65582365 17 + TSS region transcription start site region 151684
Tssr151685 18 65582390 to 65582399 9 + TSS region transcription start site region 151685
Tssr151686 18 65583182 to 65583194 12 + TSS region transcription start site region 151686
Tssr153710 18 65584144 to 65584162 18 - TSS region transcription start site region 153710
Tssr153711 18 65587049 to 65587082 33 - TSS region transcription start site region 153711
Tssr151687 18 65587462 to 65587476 14 + TSS region transcription start site region 151687
Tssr151688 18 65587484 to 65587497 13 + TSS region transcription start site region 151688
Tssr151689 18 65588111 to 65588128 17 + TSS region transcription start site region 151689
Tssr151690 18 65594184 to 65594186 2 + TSS region transcription start site region 151690
Gm37643 18 65603834 to 65605093 1259 + unclassified gene predicted gene, 37643
Tssr151691 18 65624033 to 65624071 38 + TSS region transcription start site region 151691
Tssr151692 18 65626848 to 65626854 6 + TSS region transcription start site region 151692
Tssr151693 18 65631743 to 65631747 4 + TSS region transcription start site region 151693
Tssr151694 18 65634820 to 65634824 4 + TSS region transcription start site region 151694
Gm18281 18 65638753 to 65644346 5593 + pseudogene predicted gene, 18281
D18Mit161 18 65677632 to 65677800 168 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 161
Tssr153712 18 65697608 to 65697624 16 - TSS region transcription start site region 153712
Tssr151695 18 65697984 to 65698004 20 + TSS region transcription start site region 151695
Tssr5355 18 65698134 to 65698156 22 + TSS region transcription start site region 5355
Tssr151696 18 65698253 to 65698277 24 + TSS region transcription start site region 151696
Oacyl 18 65698268 to 65751601 53333 + protein coding gene O-acyltransferase like
Tssr151697 18 65698327 to 65698336 9 + TSS region transcription start site region 151697
Tssr153713 18 65698488 to 65698511 23 - TSS region transcription start site region 153713
Tssr153714 18 65767086 to 65767093 7 - TSS region transcription start site region 153714
Cpgi10152 18 65800117 to 65801011 894 CpG island CpG island 10152
Tssr151698 18 65800543 to 65800599 56 + TSS region transcription start site region 151698
Sec11c 18 65800578 to 65817660 17082 + protein coding gene SEC11 homolog C, signal peptidase complex subunit
Tssr151699 18 65800607 to 65800618 11 + TSS region transcription start site region 151699
Tssr151700 18 65801443 to 65801469 26 + TSS region transcription start site region 151700
Tssr151701 18 65803595 to 65803599 4 + TSS region transcription start site region 151701
Tssr151702 18 65806126 to 65806137 11 + TSS region transcription start site region 151702
Tssr151703 18 65814633 to 65814655 22 + TSS region transcription start site region 151703
Gm30094 18 65863340 to 65894755 31415 - lncRNA gene predicted gene, 30094
Grp 18 65872820 to 65886579 13759 + protein coding gene gastrin releasing peptide
Cpgi10153 18 65873233 to 65873958 725 CpG island CpG island 10153
Tssr151704 18 65873478 to 65873495 17 + TSS region transcription start site region 151704
Tssr153715 18 65873859 to 65873863 4 - TSS region transcription start site region 153715
Tssr153716 18 65873872 to 65873885 13 - TSS region transcription start site region 153716
Tssr153717 18 65890748 to 65890762 14 - TSS region transcription start site region 153717
Gm25150 18 65907163 to 65907222 59 - snRNA gene predicted gene, 25150
Cpgi10154 18 65934610 to 65935600 990 CpG island CpG island 10154
Rax 18 65934639 to 65939089 4450 - protein coding gene retina and anterior neural fold homeobox
Tssr153718 18 65935945 to 65935978 33 - TSS region transcription start site region 153718
Raxos1 18 65937538 to 65940447 2909 + lincRNA gene retina and anterior neural fold homeobox, opposite strand 1
Cpgi10155 18 65937660 to 65939139 1479 CpG island CpG island 10155
Tssr153719 18 65939019 to 65939030 11 - TSS region transcription start site region 153719
Tssr153720 18 65939048 to 65939088 40 - TSS region transcription start site region 153720
Tssr153721 18 65939098 to 65939103 5 - TSS region transcription start site region 153721
Tssr153722 18 65939797 to 65939807 10 - TSS region transcription start site region 153722
Cplx4 18 65955727 to 65970178 14451 - protein coding gene complexin 4
Tssr153723 18 65970084 to 65970089 5 - TSS region transcription start site region 153723
Tssr153724 18 65970184 to 65970201 17 - TSS region transcription start site region 153724
Tssr153725 18 65970203 to 65970222 19 - TSS region transcription start site region 153725
Tssr5356 18 65970227 to 65970232 5 - TSS region transcription start site region 5356
Tssr153726 18 65970236 to 65970247 11 - TSS region transcription start site region 153726
Lman1 18 65980739 to 66002635 21896 - protein coding gene lectin, mannose-binding, 1
Cpgi10156 18 66002067 to 66002930 863 CpG island CpG island 10156
Tssr153727 18 66002612 to 66002637 25 - TSS region transcription start site region 153727
Tssr153728 18 66006088 to 66006089 1 - TSS region transcription start site region 153728
Tssr153729 18 66019959 to 66019991 32 - TSS region transcription start site region 153729
Tssr153730 18 66022490 to 66022505 15 - TSS region transcription start site region 153730
Tssr153731 18 66022582 to 66022600 18 - TSS region transcription start site region 153731
Ccbe1 18 66056855 to 66291838 234983 - protein coding gene collagen and calcium binding EGF domains 1
Tssr153732 18 66059502 to 66059517 15 - TSS region transcription start site region 153732
Tssr5357 18 66059547 to 66059558 11 - TSS region transcription start site region 5357
Tssr153733 18 66059561 to 66059592 31 - TSS region transcription start site region 153733
Cpgi10157 18 66084721 to 66085260 539 CpG island CpG island 10157
Tssr153734 18 66153399 to 66153407 8 - TSS region transcription start site region 153734
Tssr153735 18 66153416 to 66153427 11 - TSS region transcription start site region 153735
Tssr153736 18 66211976 to 66211981 5 - TSS region transcription start site region 153736
Tssr153737 18 66212350 to 66212354 4 - TSS region transcription start site region 153737
Mir694 18 66219264 to 66219333 69 - miRNA gene microRNA 694
Cpgi10158 18 66291039 to 66292168 1129 CpG island CpG island 10158
Gm15958 18 66291274 to 66319607 28333 + unclassified non-coding RNA gene predicted gene 15958
Tssr153738 18 66291770 to 66291840 70 - TSS region transcription start site region 153738
Tssr153739 18 66292082 to 66292097 15 - TSS region transcription start site region 153739
Cpgi10159 18 66292392 to 66292587 195 CpG island CpG island 10159
Tssr153740 18 66292648 to 66292667 19 - TSS region transcription start site region 153740
Gm20294 18 66417143 to 66418131 988 + pseudogene predicted gene, 20294
Cpgi10160 18 66458194 to 66459389 1195 CpG island CpG island 10160
Tssr151705 18 66458587 to 66458604 17 + TSS region transcription start site region 151705
Pmaip1 18 66458604 to 66465550 6946 + protein coding gene phorbol-12-myristate-13-acetate-induced protein 1
Cpgi10161 18 66460854 to 66461124 270 CpG island CpG island 10161
Cpgi10162 18 66470804 to 66471118 314 CpG island CpG island 10162
Tssr151706 18 66470842 to 66470847 5 + TSS region transcription start site region 151706
Tssr153741 18 66471514 to 66471521 7 - TSS region transcription start site region 153741
Tssr151707 18 66475623 to 66475642 19 + TSS region transcription start site region 151707
Tssr153742 18 66476555 to 66476561 6 - TSS region transcription start site region 153742
Tssr153743 18 66504059 to 66504062 3 - TSS region transcription start site region 153743