Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:65247820-66511579

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229 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq1 18 63670000 to 65295000 1625000 QTL methacholine sensitivity QTL 1, baseline
Flal2 18 64000000 to 66000000 2000000 QTL fatty liver accumulation QTL 2, females only
Gm29966 18 65244273 to 65248058 3785 + lncRNA gene predicted gene, 29966
Tssr151591 18 65248238 to 65248260 22 + TSS region transcription start site region 151591
Mir122 18 65248861 to 65248926 65 + miRNA gene microRNA 122
Tssr151592 18 65248924 to 65248925 1 + TSS region transcription start site region 151592
Alpk2 18 65265529 to 65393888 128359 - protein coding gene alpha-kinase 2
Tssr151593 18 65302927 to 65302966 39 + TSS region transcription start site region 151593
Tssr153689 18 65306050 to 65306065 15 - TSS region transcription start site region 153689
F730048M01Rik 18 65306431 to 65309875 3444 unclassified gene RIKEN cDNA F730048M01 gene
Tssr153690 18 65307739 to 65307770 31 - TSS region transcription start site region 153690
Tssr153691 18 65322139 to 65322152 13 - TSS region transcription start site region 153691
Tssr153692 18 65328628 to 65328644 16 - TSS region transcription start site region 153692
Tssr153693 18 65328682 to 65328696 14 - TSS region transcription start site region 153693
Tssr153694 18 65349756 to 65349778 22 - TSS region transcription start site region 153694
Tssr151594 18 65350050 to 65350071 21 + TSS region transcription start site region 151594
Gm41757 18 65350665 to 65368726 18061 + lncRNA gene predicted gene, 41757
Tssr151595 18 65352406 to 65352412 6 + TSS region transcription start site region 151595
Tssr153695 18 65375401 to 65375416 15 - TSS region transcription start site region 153695
Tssr151596 18 65375670 to 65375710 40 + TSS region transcription start site region 151596
Tssr153696 18 65381657 to 65381680 23 - TSS region transcription start site region 153696
Tssr153697 18 65381896 to 65381919 23 - TSS region transcription start site region 153697
Tssr151597 18 65382049 to 65382073 24 + TSS region transcription start site region 151597
Tssr151598 18 65382074 to 65382098 24 + TSS region transcription start site region 151598
Tssr153698 18 65382520 to 65382531 11 - TSS region transcription start site region 153698
Tssr151599 18 65382690 to 65382712 22 + TSS region transcription start site region 151599
D18Mit182 18 65385206 to 65385316 110 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 182
Tssr151600 18 65386025 to 65386043 18 + TSS region transcription start site region 151600
Tssr151601 18 65386055 to 65386099 44 + TSS region transcription start site region 151601
Tssr153699 18 65393698 to 65393709 11 - TSS region transcription start site region 153699
Tssr153700 18 65393844 to 65393922 78 - TSS region transcription start site region 153700
Tssr153701 18 65393954 to 65393963 9 - TSS region transcription start site region 153701
Tssr153702 18 65393980 to 65393991 11 - TSS region transcription start site region 153702
Tssr153703 18 65394008 to 65394021 13 - TSS region transcription start site region 153703
Tssr151602 18 65412828 to 65412830 2 + TSS region transcription start site region 151602
Tssr151603 18 65412903 to 65412910 7 + TSS region transcription start site region 151603
Tssr151604 18 65414987 to 65414994 7 + TSS region transcription start site region 151604
Tssr151605 18 65414996 to 65415008 12 + TSS region transcription start site region 151605
Tssr153704 18 65416391 to 65416407 16 - TSS region transcription start site region 153704
Gm46618 18 65418971 to 65419388 417 - pseudogene predicted gene, 46618
Gm22567 18 65427469 to 65427810 341 + unclassified non-coding RNA gene predicted gene, 22567
Tssr153705 18 65427807 to 65427809 2 - TSS region transcription start site region 153705
Tssr151606 18 65430108 to 65430111 3 + TSS region transcription start site region 151606
Cpgi10150 18 65430405 to 65431766 1361 CpG island CpG island 10150
Tssr151607 18 65430617 to 65430644 27 + TSS region transcription start site region 151607
Tssr151608 18 65430769 to 65430782 13 + TSS region transcription start site region 151608
Tssr151609 18 65430945 to 65430973 28 + TSS region transcription start site region 151609
Malt1 18 65430962 to 65478823 47861 + protein coding gene MALT1 paracaspase
Tssr151610 18 65430984 to 65431011 27 + TSS region transcription start site region 151610
Tssr151611 18 65431012 to 65431037 25 + TSS region transcription start site region 151611
Tssr151612 18 65431049 to 65431078 29 + TSS region transcription start site region 151612
Tssr151613 18 65431082 to 65431087 5 + TSS region transcription start site region 151613
Tssr151614 18 65431144 to 65431155 11 + TSS region transcription start site region 151614
Tssr151615 18 65432069 to 65432082 13 + TSS region transcription start site region 151615
Tssr151616 18 65434997 to 65435008 11 + TSS region transcription start site region 151616
Tssr151617 18 65435287 to 65435300 13 + TSS region transcription start site region 151617
Tssr151618 18 65436124 to 65436138 14 + TSS region transcription start site region 151618
Tssr151619 18 65437379 to 65437391 12 + TSS region transcription start site region 151619
Tssr151620 18 65437403 to 65437422 19 + TSS region transcription start site region 151620
Tssr151621 18 65438186 to 65438208 22 + TSS region transcription start site region 151621
Tssr151622 18 65438564 to 65438586 22 + TSS region transcription start site region 151622
Tssr151623 18 65438659 to 65438673 14 + TSS region transcription start site region 151623
Tssr151624 18 65438818 to 65438832 14 + TSS region transcription start site region 151624
Tssr151625 18 65439540 to 65439562 22 + TSS region transcription start site region 151625
Tssr151626 18 65441776 to 65441802 26 + TSS region transcription start site region 151626
Tssr151627 18 65442215 to 65442227 12 + TSS region transcription start site region 151627
Tssr151628 18 65442326 to 65442345 19 + TSS region transcription start site region 151628
Tssr151629 18 65442364 to 65442380 16 + TSS region transcription start site region 151629
Tssr151630 18 65442381 to 65442393 12 + TSS region transcription start site region 151630
Tssr151631 18 65442589 to 65442605 16 + TSS region transcription start site region 151631
Tssr151632 18 65444898 to 65444915 17 + TSS region transcription start site region 151632
Tssr151633 18 65445566 to 65445575 9 + TSS region transcription start site region 151633
Tssr151634 18 65446608 to 65446658 50 + TSS region transcription start site region 151634
Tssr151635 18 65447605 to 65447637 32 + TSS region transcription start site region 151635
Tssr151636 18 65447684 to 65447695 11 + TSS region transcription start site region 151636
Tssr151637 18 65448174 to 65448200 26 + TSS region transcription start site region 151637
Tssr151638 18 65448201 to 65448216 15 + TSS region transcription start site region 151638
Tssr151639 18 65448269 to 65448295 26 + TSS region transcription start site region 151639
Tssr151640 18 65449066 to 65449108 42 + TSS region transcription start site region 151640
Tssr151641 18 65449905 to 65449927 22 + TSS region transcription start site region 151641
Tssr151642 18 65449941 to 65449950 9 + TSS region transcription start site region 151642
Tssr151643 18 65450698 to 65450709 11 + TSS region transcription start site region 151643
Tssr151644 18 65453395 to 65453401 6 + TSS region transcription start site region 151644
Tssr151645 18 65453694 to 65453714 20 + TSS region transcription start site region 151645
Tssr151646 18 65453911 to 65453945 34 + TSS region transcription start site region 151646
Tssr151647 18 65453993 to 65454010 17 + TSS region transcription start site region 151647
Tssr151648 18 65454102 to 65454111 9 + TSS region transcription start site region 151648
Tssr151649 18 65454172 to 65454185 13 + TSS region transcription start site region 151649
Tssr151650 18 65454832 to 65454845 13 + TSS region transcription start site region 151650
Tssr151651 18 65455858 to 65455882 24 + TSS region transcription start site region 151651
Tssr151652 18 65455980 to 65455991 11 + TSS region transcription start site region 151652
Tssr151653 18 65456198 to 65456209 11 + TSS region transcription start site region 151653
Tssr151654 18 65456222 to 65456245 23 + TSS region transcription start site region 151654
Tssr151655 18 65456449 to 65456459 10 + TSS region transcription start site region 151655
Tssr151656 18 65458158 to 65458179 21 + TSS region transcription start site region 151656
Tssr151657 18 65458367 to 65458380 13 + TSS region transcription start site region 151657
Tssr5354 18 65459799 to 65459810 11 + TSS region transcription start site region 5354
Tssr151658 18 65461016 to 65461030 14 + TSS region transcription start site region 151658
Tssr151659 18 65461108 to 65461119 11 + TSS region transcription start site region 151659
Tssr151660 18 65462749 to 65462760 11 + TSS region transcription start site region 151660
Tssr151661 18 65462912 to 65462917 5 + TSS region transcription start site region 151661
Tssr151662 18 65463274 to 65463312 38 + TSS region transcription start site region 151662
Tssr151663 18 65464115 to 65464119 4 + TSS region transcription start site region 151663
Tssr151664 18 65465943 to 65465970 27 + TSS region transcription start site region 151664
Tssr151665 18 65466637 to 65466654 17 + TSS region transcription start site region 151665
Tssr151666 18 65470476 to 65470492 16 + TSS region transcription start site region 151666
Tssr151667 18 65471577 to 65471588 11 + TSS region transcription start site region 151667
Tssr151668 18 65472675 to 65472692 17 + TSS region transcription start site region 151668
Tssr151669 18 65473032 to 65473047 15 + TSS region transcription start site region 151669
Tssr151670 18 65476186 to 65476201 15 + TSS region transcription start site region 151670
Tssr151671 18 65476305 to 65476335 30 + TSS region transcription start site region 151671
Tssr153706 18 65476367 to 65476383 16 - TSS region transcription start site region 153706
Tssr151672 18 65476494 to 65476509 15 + TSS region transcription start site region 151672
Tssr151673 18 65476517 to 65476530 13 + TSS region transcription start site region 151673
Tssr151674 18 65476892 to 65476905 13 + TSS region transcription start site region 151674
Tssr151675 18 65477099 to 65477106 7 + TSS region transcription start site region 151675
Tssr151676 18 65478475 to 65478505 30 + TSS region transcription start site region 151676
Tssr151677 18 65482056 to 65482060 4 + TSS region transcription start site region 151677
D18Mit107 18 65497282 to 65497549 267 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 107
Gm41758 18 65497510 to 65509541 12031 + lncRNA gene predicted gene, 41758
Tssr153707 18 65505490 to 65505537 47 - TSS region transcription start site region 153707
Gm30018 18 65522429 to 65532039 9610 - lncRNA gene predicted gene, 30018
Gm41759 18 65537417 to 65542437 5020 - lncRNA gene predicted gene, 41759
Gm41760 18 65543939 to 65579186 35247 - lncRNA gene predicted gene, 41760
Gm46625 18 65552881 to 65556975 4094 + lncRNA gene predicted gene, 46625
D18Ertd155e 18 65562973 to 65563177 204 DNA segment DNA segment, Chr 18, ERATO Doi 155, expressed
Tssr153708 18 65565775 to 65565789 14 - TSS region transcription start site region 153708
Zfp532 18 65580230 to 65689443 109213 + protein coding gene zinc finger protein 532
Tssr151678 18 65580377 to 65580400 23 + TSS region transcription start site region 151678
Cpgi10151 18 65580387 to 65581783 1396 CpG island CpG island 10151
Tssr151679 18 65580756 to 65580798 42 + TSS region transcription start site region 151679
Tssr151680 18 65580800 to 65580817 17 + TSS region transcription start site region 151680
Tssr151681 18 65581704 to 65581761 57 + TSS region transcription start site region 151681
Tssr153709 18 65582158 to 65582186 28 - TSS region transcription start site region 153709
Tssr151682 18 65582257 to 65582275 18 + TSS region transcription start site region 151682
Tssr151683 18 65582281 to 65582310 29 + TSS region transcription start site region 151683
Tssr151684 18 65582348 to 65582365 17 + TSS region transcription start site region 151684
Tssr151685 18 65582390 to 65582399 9 + TSS region transcription start site region 151685
Tssr151686 18 65583182 to 65583194 12 + TSS region transcription start site region 151686
Tssr153710 18 65584144 to 65584162 18 - TSS region transcription start site region 153710
Tssr153711 18 65587049 to 65587082 33 - TSS region transcription start site region 153711
Tssr151687 18 65587462 to 65587476 14 + TSS region transcription start site region 151687
Tssr151688 18 65587484 to 65587497 13 + TSS region transcription start site region 151688
Tssr151689 18 65588111 to 65588128 17 + TSS region transcription start site region 151689
Tssr151690 18 65594184 to 65594186 2 + TSS region transcription start site region 151690
Gm37643 18 65603834 to 65605093 1259 + unclassified gene predicted gene, 37643
Tssr151691 18 65624033 to 65624071 38 + TSS region transcription start site region 151691
Tssr151692 18 65626848 to 65626854 6 + TSS region transcription start site region 151692
Tssr151693 18 65631743 to 65631747 4 + TSS region transcription start site region 151693
Tssr151694 18 65634820 to 65634824 4 + TSS region transcription start site region 151694
Gm18281 18 65638753 to 65644346 5593 + pseudogene predicted gene, 18281
D18Mit161 18 65677632 to 65677800 168 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 161
Tssr153712 18 65697608 to 65697624 16 - TSS region transcription start site region 153712
Tssr151695 18 65697984 to 65698004 20 + TSS region transcription start site region 151695
Tssr5355 18 65698134 to 65698156 22 + TSS region transcription start site region 5355
Tssr151696 18 65698253 to 65698277 24 + TSS region transcription start site region 151696
Oacyl 18 65698268 to 65751601 53333 + protein coding gene O-acyltransferase like
Tssr151697 18 65698327 to 65698336 9 + TSS region transcription start site region 151697
Tssr153713 18 65698488 to 65698511 23 - TSS region transcription start site region 153713
Tssr153714 18 65767086 to 65767093 7 - TSS region transcription start site region 153714
Cpgi10152 18 65800117 to 65801011 894 CpG island CpG island 10152
Tssr151698 18 65800543 to 65800599 56 + TSS region transcription start site region 151698
Sec11c 18 65800578 to 65817660 17082 + protein coding gene SEC11 homolog C, signal peptidase complex subunit
Tssr151699 18 65800607 to 65800618 11 + TSS region transcription start site region 151699
Tssr151700 18 65801443 to 65801469 26 + TSS region transcription start site region 151700
Tssr151701 18 65803595 to 65803599 4 + TSS region transcription start site region 151701
Tssr151702 18 65806126 to 65806137 11 + TSS region transcription start site region 151702
Tssr151703 18 65814633 to 65814655 22 + TSS region transcription start site region 151703
Gm30094 18 65863340 to 65894755 31415 - lncRNA gene predicted gene, 30094
Grp 18 65872820 to 65886579 13759 + protein coding gene gastrin releasing peptide
Cpgi10153 18 65873233 to 65873958 725 CpG island CpG island 10153
Tssr151704 18 65873478 to 65873495 17 + TSS region transcription start site region 151704
Tssr153715 18 65873859 to 65873863 4 - TSS region transcription start site region 153715
Tssr153716 18 65873872 to 65873885 13 - TSS region transcription start site region 153716
Tssr153717 18 65890748 to 65890762 14 - TSS region transcription start site region 153717
Gm25150 18 65907163 to 65907222 59 - snRNA gene predicted gene, 25150
Cpgi10154 18 65934610 to 65935600 990 CpG island CpG island 10154
Rax 18 65934639 to 65939089 4450 - protein coding gene retina and anterior neural fold homeobox
Tssr153718 18 65935945 to 65935978 33 - TSS region transcription start site region 153718
Raxos1 18 65937538 to 65940447 2909 + lincRNA gene retina and anterior neural fold homeobox, opposite strand 1
Cpgi10155 18 65937660 to 65939139 1479 CpG island CpG island 10155
Tssr153719 18 65939019 to 65939030 11 - TSS region transcription start site region 153719
Tssr153720 18 65939048 to 65939088 40 - TSS region transcription start site region 153720
Tssr153721 18 65939098 to 65939103 5 - TSS region transcription start site region 153721
Tssr153722 18 65939797 to 65939807 10 - TSS region transcription start site region 153722
Cplx4 18 65955727 to 65970178 14451 - protein coding gene complexin 4
Tssr153723 18 65970084 to 65970089 5 - TSS region transcription start site region 153723
Tssr153724 18 65970184 to 65970201 17 - TSS region transcription start site region 153724
Tssr153725 18 65970203 to 65970222 19 - TSS region transcription start site region 153725
Tssr5356 18 65970227 to 65970232 5 - TSS region transcription start site region 5356
Tssr153726 18 65970236 to 65970247 11 - TSS region transcription start site region 153726
Lman1 18 65980739 to 66002635 21896 - protein coding gene lectin, mannose-binding, 1
Cpgi10156 18 66002067 to 66002930 863 CpG island CpG island 10156
Tssr153727 18 66002612 to 66002637 25 - TSS region transcription start site region 153727
Tssr153728 18 66006088 to 66006089 1 - TSS region transcription start site region 153728
Tssr153729 18 66019959 to 66019991 32 - TSS region transcription start site region 153729
Tssr153730 18 66022490 to 66022505 15 - TSS region transcription start site region 153730
Tssr153731 18 66022582 to 66022600 18 - TSS region transcription start site region 153731
Ccbe1 18 66056855 to 66291838 234983 - protein coding gene collagen and calcium binding EGF domains 1
Tssr153732 18 66059502 to 66059517 15 - TSS region transcription start site region 153732