Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 18:65215529-65443888

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83 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq1 18 63670000 to 65295000 1625000 QTL methacholine sensitivity QTL 1, baseline
Nedd4l 18 64887705 to 65217828 330123 + protein coding gene neural precursor cell expressed, developmentally down-regulated gene 4-like
Tssr153687 18 65220822 to 65220830 8 - TSS region transcription start site region 153687
Tssr153688 18 65222686 to 65222691 5 - TSS region transcription start site region 153688
Tssr5353 18 65222986 to 65222993 7 + TSS region transcription start site region 5353
Tssr151584 18 65244274 to 65244280 6 + TSS region transcription start site region 151584
Gm29966 18 65244287 to 65252621 8334 + lncRNA gene predicted gene, 29966
Tssr151585 18 65244287 to 65244305 18 + TSS region transcription start site region 151585
Tssr151586 18 65244309 to 65244322 13 + TSS region transcription start site region 151586
Tssr151587 18 65245993 to 65246005 12 + TSS region transcription start site region 151587
Tssr151588 18 65246152 to 65246179 27 + TSS region transcription start site region 151588
Tssr151589 18 65247116 to 65247127 11 + TSS region transcription start site region 151589
Tssr151590 18 65247182 to 65247194 12 + TSS region transcription start site region 151590
Tssr151591 18 65248238 to 65248260 22 + TSS region transcription start site region 151591
Mir122 18 65248861 to 65248926 65 + miRNA gene microRNA 122
Tssr151592 18 65248924 to 65248925 1 + TSS region transcription start site region 151592
Alpk2 18 65265529 to 65393888 128359 - protein coding gene alpha-kinase 2
Tssr151593 18 65302927 to 65302966 39 + TSS region transcription start site region 151593
Tssr153689 18 65306050 to 65306065 15 - TSS region transcription start site region 153689
F730048M01Rik 18 65306430 to 65309876 3446 + lncRNA gene RIKEN cDNA F730048M01 gene
Tssr153690 18 65307739 to 65307770 31 - TSS region transcription start site region 153690
Tssr153691 18 65322139 to 65322152 13 - TSS region transcription start site region 153691
Tssr153692 18 65328628 to 65328644 16 - TSS region transcription start site region 153692
Tssr153693 18 65328682 to 65328696 14 - TSS region transcription start site region 153693
Gm50220 18 65342821 to 65343344 523 + pseudogene predicted gene, 50220
Gm41757 18 65349157 to 65368824 19667 + lncRNA gene predicted gene, 41757
Tssr153694 18 65349756 to 65349778 22 - TSS region transcription start site region 153694
Tssr151594 18 65350050 to 65350071 21 + TSS region transcription start site region 151594
Tssr151595 18 65352406 to 65352412 6 + TSS region transcription start site region 151595
Tssr153695 18 65375401 to 65375416 15 - TSS region transcription start site region 153695
Tssr151596 18 65375670 to 65375710 40 + TSS region transcription start site region 151596
Tssr153696 18 65381657 to 65381680 23 - TSS region transcription start site region 153696
Tssr153697 18 65381896 to 65381919 23 - TSS region transcription start site region 153697
Tssr151597 18 65382049 to 65382073 24 + TSS region transcription start site region 151597
Tssr151598 18 65382074 to 65382098 24 + TSS region transcription start site region 151598
Tssr153698 18 65382520 to 65382531 11 - TSS region transcription start site region 153698
Tssr151599 18 65382690 to 65382712 22 + TSS region transcription start site region 151599
D18Mit182 18 65385206 to 65385316 110 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 182
Tssr151600 18 65386025 to 65386043 18 + TSS region transcription start site region 151600
Tssr151601 18 65386055 to 65386099 44 + TSS region transcription start site region 151601
Gm50221 18 65390334 to 65393031 2697 + lncRNA gene predicted gene, 50221
Tssr153699 18 65393698 to 65393709 11 - TSS region transcription start site region 153699
Tssr153700 18 65393844 to 65393922 78 - TSS region transcription start site region 153700
Tssr153701 18 65393954 to 65393963 9 - TSS region transcription start site region 153701
Tssr153702 18 65393980 to 65393991 11 - TSS region transcription start site region 153702
Tssr153703 18 65394008 to 65394021 13 - TSS region transcription start site region 153703
Tssr151602 18 65412828 to 65412830 2 + TSS region transcription start site region 151602
Tssr151603 18 65412903 to 65412910 7 + TSS region transcription start site region 151603
Tssr151604 18 65414987 to 65414994 7 + TSS region transcription start site region 151604
Tssr151605 18 65414996 to 65415008 12 + TSS region transcription start site region 151605
Gm50228 18 65414999 to 65415523 524 + lncRNA gene predicted gene, 50228
Tssr153704 18 65416391 to 65416407 16 - TSS region transcription start site region 153704
Gm46618 18 65418971 to 65419347 376 - pseudogene predicted gene, 46618
Gm22567 18 65427469 to 65427810 341 + unclassified non-coding RNA gene predicted gene, 22567
Tssr153705 18 65427807 to 65427809 2 - TSS region transcription start site region 153705
Tssr151606 18 65430108 to 65430111 3 + TSS region transcription start site region 151606
Cpgi10150 18 65430405 to 65431766 1361 CpG island CpG island 10150
Tssr151607 18 65430617 to 65430644 27 + TSS region transcription start site region 151607
Tssr151608 18 65430769 to 65430782 13 + TSS region transcription start site region 151608
Malt1 18 65430939 to 65478888 47949 + protein coding gene MALT1 paracaspase
Tssr151609 18 65430945 to 65430973 28 + TSS region transcription start site region 151609
Tssr151610 18 65430984 to 65431011 27 + TSS region transcription start site region 151610
Tssr151611 18 65431012 to 65431037 25 + TSS region transcription start site region 151611
Tssr151612 18 65431049 to 65431078 29 + TSS region transcription start site region 151612
Tssr151613 18 65431082 to 65431087 5 + TSS region transcription start site region 151613
Tssr151614 18 65431144 to 65431155 11 + TSS region transcription start site region 151614
Tssr151615 18 65432069 to 65432082 13 + TSS region transcription start site region 151615
Tssr151616 18 65434997 to 65435008 11 + TSS region transcription start site region 151616
Tssr151617 18 65435287 to 65435300 13 + TSS region transcription start site region 151617
Tssr151618 18 65436124 to 65436138 14 + TSS region transcription start site region 151618
Tssr151619 18 65437379 to 65437391 12 + TSS region transcription start site region 151619
Tssr151620 18 65437403 to 65437422 19 + TSS region transcription start site region 151620
Tssr151621 18 65438186 to 65438208 22 + TSS region transcription start site region 151621
Tssr151622 18 65438564 to 65438586 22 + TSS region transcription start site region 151622
Tssr151623 18 65438659 to 65438673 14 + TSS region transcription start site region 151623
Tssr151624 18 65438818 to 65438832 14 + TSS region transcription start site region 151624
Tssr151625 18 65439540 to 65439562 22 + TSS region transcription start site region 151625
Tssr151626 18 65441776 to 65441802 26 + TSS region transcription start site region 151626
Tssr151627 18 65442215 to 65442227 12 + TSS region transcription start site region 151627
Tssr151628 18 65442326 to 65442345 19 + TSS region transcription start site region 151628
Tssr151629 18 65442364 to 65442380 16 + TSS region transcription start site region 151629
Tssr151630 18 65442381 to 65442393 12 + TSS region transcription start site region 151630
Tssr151631 18 65442589 to 65442605 16 + TSS region transcription start site region 151631