Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:64354396-64604407

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Onecut2 18 64340364 to 64398488 58124 + protein coding gene one cut domain, family member 2
Tssr151541 18 64386589 to 64386605 16 + TSS region transcription start site region 151541
Tssr151542 18 64386648 to 64386659 11 + TSS region transcription start site region 151542
A330041D05Rik 18 64388502 to 64390265 1763 unclassified gene RIKEN cDNA A330041D05 gene
Gm36804 18 64428018 to 64428684 666 - pseudogene predicted gene, 36804
Cpgi10141 18 64428304 to 64428712 408 CpG island CpG island 10141
Amd-ps3 18 64448519 to 64450014 1495 - pseudogene S-adenosylmethionine decarboxylase, pseudogene 3
Fech 18 64456550 to 64489066 32516 - protein coding gene ferrochelatase
Tssr153660 18 64457292 to 64457309 17 - TSS region transcription start site region 153660
Tssr153661 18 64457876 to 64457886 10 - TSS region transcription start site region 153661
D18Mit206 18 64458775 to 64458894 119 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 206
Tssr153662 18 64476614 to 64476618 4 - TSS region transcription start site region 153662
Tssr153663 18 64479383 to 64479392 9 - TSS region transcription start site region 153663
Tssr153664 18 64479396 to 64479407 11 - TSS region transcription start site region 153664
Cpgi10142 18 64488590 to 64489525 935 CpG island CpG island 10142
Tssr153665 18 64488946 to 64488976 30 - TSS region transcription start site region 153665
Tssr153666 18 64488977 to 64488982 5 - TSS region transcription start site region 153666
Tssr153667 18 64489022 to 64489040 18 - TSS region transcription start site region 153667
Tssr153668 18 64489042 to 64489082 40 - TSS region transcription start site region 153668
Nars 18 64499665 to 64516557 16892 - protein coding gene asparaginyl-tRNA synthetase
Tssr153669 18 64504998 to 64505008 10 - TSS region transcription start site region 153669
Tssr151543 18 64511783 to 64511817 34 + TSS region transcription start site region 151543
Tssr153670 18 64516043 to 64516048 5 - TSS region transcription start site region 153670
Cpgi10143 18 64516124 to 64516785 661 CpG island CpG island 10143
Tssr153671 18 64516492 to 64516545 53 - TSS region transcription start site region 153671
Tssr153672 18 64516547 to 64516565 18 - TSS region transcription start site region 153672
Tssr151544 18 64519942 to 64519956 14 + TSS region transcription start site region 151544
Atp8b1 18 64528979 to 64661000 132021 - protein coding gene ATPase, class I, type 8B, member 1
Cpgi10144 18 64531274 to 64531654 380 CpG island CpG island 10144
Tssr151545 18 64554666 to 64554670 4 + TSS region transcription start site region 151545
Cpgi10145 18 64556793 to 64556946 153 CpG island CpG island 10145