Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:63272004-63712350

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Piezo2 18 63010213 to 63387183 376970 - protein coding gene piezo-type mechanosensitive ion channel component 2
Carcdq2 18 63290216 to 63290216 0 QTL cardiac collagen deposition QTL 2
Cpgi10130 18 63385984 to 63387396 1412 CpG island CpG island 10130
Tssr153637 18 63386495 to 63386507 12 - TSS region transcription start site region 153637
Tssr153638 18 63386511 to 63386526 15 - TSS region transcription start site region 153638
Tssr5350 18 63387045 to 63387054 9 - TSS region transcription start site region 5350
Tssr153639 18 63387124 to 63387189 65 - TSS region transcription start site region 153639
Gm26972 18 63399245 to 63402876 3631 + lincRNA gene predicted gene, 26972
Cpgi10131 18 63492004 to 63492350 346 CpG island CpG island 10131
Gm23581 18 63508169 to 63508231 62 + snRNA gene predicted gene, 23581
Gm22560 18 63509895 to 63510014 119 + rRNA gene predicted gene, 22560
Gm22210 18 63533068 to 63533211 143 + snoRNA gene predicted gene, 22210
Gm6789 18 63543434 to 63545204 1770 - pseudogene predicted gene 6789
Tssr153640 18 63545196 to 63545206 10 - TSS region transcription start site region 153640
Gm24848 18 63584736 to 63584842 106 + snRNA gene predicted gene, 24848
Txnl1 18 63662801 to 63692359 29558 - protein coding gene thioredoxin-like 1
Mcsq1 18 63670000 to 65295000 1625000 QTL methacholine sensitivity QTL 1, baseline
Tssr153641 18 63682254 to 63682265 11 - TSS region transcription start site region 153641
Tssr153642 18 63682273 to 63682312 39 - TSS region transcription start site region 153642
Cpgi10132 18 63691709 to 63692798 1089 CpG island CpG island 10132
Tssr153643 18 63692217 to 63692228 11 - TSS region transcription start site region 153643
Tssr153644 18 63692279 to 63692290 11 - TSS region transcription start site region 153644
Tssr153645 18 63692291 to 63692302 11 - TSS region transcription start site region 153645
Tssr153646 18 63692309 to 63692338 29 - TSS region transcription start site region 153646
Tssr153647 18 63692341 to 63692374 33 - TSS region transcription start site region 153647
Tssr153648 18 63692386 to 63692391 5 - TSS region transcription start site region 153648
Tssr153649 18 63692392 to 63692416 24 - TSS region transcription start site region 153649
Tssr153650 18 63692420 to 63692431 11 - TSS region transcription start site region 153650
Tssr5351 18 63692462 to 63692473 11 + TSS region transcription start site region 5351
Gm41754 18 63693887 to 63708563 14676 - lncRNA gene predicted gene, 41754
Tssr153651 18 63694872 to 63694879 7 - TSS region transcription start site region 153651
Gm41753 18 63700620 to 63704354 3734 + lncRNA gene predicted gene, 41753
Cpgi10133 18 63708451 to 63708893 442 CpG island CpG island 10133
Tssr153652 18 63708551 to 63708574 23 - TSS region transcription start site region 153652
Tssr151514 18 63708689 to 63708730 41 + TSS region transcription start site region 151514
Wdr7 18 63708695 to 63989760 281065 + protein coding gene WD repeat domain 7
Tssr151515 18 63708732 to 63708741 9 + TSS region transcription start site region 151515