Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:62905216-63675216

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10128 18 62921927 to 62923268 1341 CpG island CpG island 10128
Tssr151501 18 62922290 to 62922308 18 + TSS region transcription start site region 151501
Tssr151502 18 62922317 to 62922339 22 + TSS region transcription start site region 151502
Apcdd1 18 62922327 to 62953195 30868 + protein coding gene adenomatosis polyposis coli down-regulated 1
Tssr151503 18 62922422 to 62922458 36 + TSS region transcription start site region 151503
Tssr151504 18 62922481 to 62922494 13 + TSS region transcription start site region 151504
Tssr151505 18 62937209 to 62937220 11 + TSS region transcription start site region 151505
Tssr151506 18 62950071 to 62950074 3 + TSS region transcription start site region 151506
Tssr151507 18 62951211 to 62951212 1 + TSS region transcription start site region 151507
Cpgi10129 18 62977665 to 62978540 875 CpG island CpG island 10129
Tssr151508 18 62977826 to 62977839 13 + TSS region transcription start site region 151508
Napg 18 62977838 to 62999450 21612 + protein coding gene N-ethylmaleimide sensitive fusion protein attachment protein gamma
Tssr151509 18 62977854 to 62977931 77 + TSS region transcription start site region 151509
Tssr151510 18 62977934 to 62977952 18 + TSS region transcription start site region 151510
Tssr151511 18 62994875 to 62994886 11 + TSS region transcription start site region 151511
Tssr151512 18 62994889 to 62994923 34 + TSS region transcription start site region 151512
Piezo2 18 63010213 to 63387183 376970 - protein coding gene piezo-type mechanosensitive ion channel component 2
Gm36651 18 63050708 to 63068897 18189 + lncRNA gene predicted gene, 36651
Tssr153636 18 63087476 to 63087480 4 - TSS region transcription start site region 153636
Tssr151513 18 63150835 to 63150841 6 + TSS region transcription start site region 151513
Carcdq2 18 63290216 to 63290216 0 QTL cardiac collagen deposition QTL 2
Cpgi10130 18 63385984 to 63387396 1412 CpG island CpG island 10130
Tssr153637 18 63386495 to 63386507 12 - TSS region transcription start site region 153637
Tssr153638 18 63386511 to 63386526 15 - TSS region transcription start site region 153638
Tssr5350 18 63387045 to 63387054 9 - TSS region transcription start site region 5350
Tssr153639 18 63387124 to 63387189 65 - TSS region transcription start site region 153639
Gm26972 18 63399245 to 63402876 3631 + lincRNA gene predicted gene, 26972
Cpgi10131 18 63492004 to 63492350 346 CpG island CpG island 10131
Gm23581 18 63508169 to 63508231 62 + snRNA gene predicted gene, 23581
Gm22560 18 63509895 to 63510014 119 + rRNA gene predicted gene, 22560
Gm22210 18 63533068 to 63533211 143 + snoRNA gene predicted gene, 22210
Gm6789 18 63543434 to 63545204 1770 - pseudogene predicted gene 6789
Tssr153640 18 63545196 to 63545206 10 - TSS region transcription start site region 153640
Gm24848 18 63584736 to 63584842 106 + snRNA gene predicted gene, 24848
Txnl1 18 63662801 to 63692359 29558 - protein coding gene thioredoxin-like 1
Mcsq1 18 63670000 to 65295000 1625000 QTL methacholine sensitivity QTL 1, baseline