Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:6245564-6735646

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41664 18 6240814 to 6268387 27573 + lncRNA gene predicted gene, 41664
Tssr149960 18 6332587 to 6332609 22 + TSS region transcription start site region 149960
Rpl27-ps3 18 6332632 to 6333042 410 + pseudogene ribosomal protein L27, pseudogene 3
Gm49986 18 6368360 to 6368797 437 + pseudogene predicted gene, 49986
Gm6291 18 6371352 to 6371660 308 - pseudogene predicted gene 6291
Epc1 18 6435951 to 6516108 80157 - protein coding gene enhancer of polycomb homolog 1
Cpgi9678 18 6489849 to 6491322 1473 CpG island CpG island 9678
Tssr149961 18 6490134 to 6490165 31 + TSS region transcription start site region 149961
Gm28529 18 6490143 to 6496962 6819 + antisense lncRNA gene predicted gene 28529
Mir1893 18 6490564 to 6490646 82 - miRNA gene microRNA 1893
Tssr152357 18 6490702 to 6490738 36 - TSS region transcription start site region 152357
Tssr152358 18 6490778 to 6490793 15 - TSS region transcription start site region 152358
Tssr152359 18 6490808 to 6490869 61 - TSS region transcription start site region 152359
Tssr152360 18 6490877 to 6490898 21 - TSS region transcription start site region 152360
Tssr152361 18 6490901 to 6490926 25 - TSS region transcription start site region 152361
Tssr152362 18 6510715 to 6510722 7 - TSS region transcription start site region 152362
Tssr152363 18 6515134 to 6515140 6 - TSS region transcription start site region 152363
Cpgi9679 18 6515978 to 6516607 629 CpG island CpG island 9679
Tssr152364 18 6516067 to 6516083 16 - TSS region transcription start site region 152364
Tssr152365 18 6516089 to 6516106 17 - TSS region transcription start site region 152365
Tssr149962 18 6516231 to 6516252 21 + TSS region transcription start site region 149962
Tssr149963 18 6516668 to 6516672 4 + TSS region transcription start site region 149963
Gm7464 18 6557130 to 6557796 666 + pseudogene predicted gene 7464
Tssr149964 18 6557152 to 6557158 6 + TSS region transcription start site region 149964
Tssr152366 18 6595474 to 6595479 5 - TSS region transcription start site region 152366
D18Mit220 18 6602571 to 6602646 75 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 220
Tssr149965 18 6603627 to 6603633 6 + TSS region transcription start site region 149965
4921524L21Rik 18 6603629 to 6638970 35341 + protein coding gene RIKEN cDNA 4921524L21 gene
Gm50077 18 6687843 to 6691317 3474 - pseudogene predicted gene, 50077
Tssr149966 18 6733733 to 6733749 16 + TSS region transcription start site region 149966
Tssr149967 18 6733779 to 6733788 9 + TSS region transcription start site region 149967
Tssr149968 18 6733893 to 6733898 5 + TSS region transcription start site region 149968
Tssr149969 18 6733953 to 6733960 7 + TSS region transcription start site region 149969