Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:62412539-62936387

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Htr4 18 62324204 to 62467802 143598 + protein coding gene 5 hydroxytryptamine (serotonin) receptor 4
Gm18653 18 62481493 to 62482129 636 - pseudogene predicted gene, 18653
Fbxo38 18 62504069 to 62548743 44674 - protein coding gene F-box protein 38
Cpgi10127 18 62548300 to 62549021 721 CpG island CpG island 10127
Tssr153626 18 62548682 to 62548717 35 - TSS region transcription start site region 153626
Tssr153627 18 62548721 to 62548765 44 - TSS region transcription start site region 153627
Tssr153628 18 62548853 to 62548878 25 - TSS region transcription start site region 153628
Tssr153629 18 62548880 to 62548894 14 - TSS region transcription start site region 153629
Spink10 18 62548911 to 62661366 112455 + protein coding gene serine peptidase inhibitor, Kazal type 10
Tssr151491 18 62548918 to 62548950 32 + TSS region transcription start site region 151491
Tssr151492 18 62548951 to 62548968 17 + TSS region transcription start site region 151492
Gm36368 18 62566463 to 62578931 12468 - lncRNA gene predicted gene, 36368
Tssr153630 18 62578926 to 62578935 9 - TSS region transcription start site region 153630
Tssr153631 18 62578937 to 62578942 5 - TSS region transcription start site region 153631
Spink7 18 62592413 to 62596264 3851 - protein coding gene serine peptidase inhibitor, Kazal type 7 (putative)
Tssr153632 18 62596320 to 62596326 6 - TSS region transcription start site region 153632
Spink13 18 62607539 to 62741387 133848 - protein coding gene serine peptidase inhibitor, Kazal type 13
Tssr153633 18 62615676 to 62615693 17 - TSS region transcription start site region 153633
Tssr153634 18 62615717 to 62615723 6 - TSS region transcription start site region 153634
Tssr153635 18 62615742 to 62615747 5 - TSS region transcription start site region 153635
Gm41751 18 62653539 to 62654995 1456 + lncRNA gene predicted gene, 41751
Tssr151493 18 62657203 to 62657212 9 + TSS region transcription start site region 151493
Tssr151494 18 62657239 to 62657245 6 + TSS region transcription start site region 151494
Tssr151495 18 62657256 to 62657279 23 + TSS region transcription start site region 151495
Tssr151496 18 62657285 to 62657303 18 + TSS region transcription start site region 151496
Tssr151497 18 62657310 to 62657313 3 + TSS region transcription start site region 151497
Tssr151498 18 62657329 to 62657340 11 + TSS region transcription start site region 151498
Tssr151499 18 62657368 to 62657370 2 + TSS region transcription start site region 151499
Gm17732 18 62662108 to 62662928 820 + protein coding gene predicted gene, 17732
Gm19159 18 62672050 to 62672833 783 + pseudogene predicted gene, 19159
Gm36598 18 62744105 to 62765941 21836 + lncRNA gene predicted gene, 36598
Tssr151500 18 62744569 to 62744594 25 + TSS region transcription start site region 151500
2700046A07Rik 18 62751674 to 62756347 4673 - lincRNA gene RIKEN cDNA 2700046A07 gene
Gm41752 18 62861969 to 62879453 17484 - lncRNA gene predicted gene, 41752
Cpgi10128 18 62921927 to 62923268 1341 CpG island CpG island 10128
Tssr151501 18 62922290 to 62922308 18 + TSS region transcription start site region 151501
Tssr151502 18 62922317 to 62922339 22 + TSS region transcription start site region 151502
Apcdd1 18 62922327 to 62953195 30868 + protein coding gene adenomatosis polyposis coli down-regulated 1
Tssr151503 18 62922422 to 62922458 36 + TSS region transcription start site region 151503
Tssr151504 18 62922481 to 62922494 13 + TSS region transcription start site region 151504