Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61960126-62404405

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sh3tc2 18 61953075 to 62015715 62640 + protein coding gene SH3 domain and tetratricopeptide repeats 2
Tssr151485 18 61965608 to 61965610 2 + TSS region transcription start site region 151485
Gm35778 18 62028176 to 62033936 5760 + lncRNA gene predicted gene, 35778
Gm35887 18 62044712 to 62083606 38894 - lncRNA gene predicted gene, 35887
Gm41750 18 62093209 to 62146379 53170 + lncRNA gene predicted gene, 41750
Tssr151486 18 62137545 to 62137551 6 + TSS region transcription start site region 151486
Tssr153621 18 62156670 to 62156675 5 - TSS region transcription start site region 153621
Gm36003 18 62163562 to 62167828 4266 + lncRNA gene predicted gene, 36003
Adrb2 18 62177817 to 62179959 2142 - protein coding gene adrenergic receptor, beta 2
Tssr153622 18 62177860 to 62177862 2 - TSS region transcription start site region 153622
Cpgi10125 18 62178966 to 62180620 1654 CpG island CpG island 10125
Tssr153623 18 62179948 to 62179986 38 - TSS region transcription start site region 153623
Tssr151487 18 62180119 to 62180182 63 + TSS region transcription start site region 151487
Gm9949 18 62180126 to 62184405 4279 + protein coding gene predicted gene 9949
Tssr151488 18 62182926 to 62182972 46 + TSS region transcription start site region 151488
Gm46634 18 62184471 to 62194083 9612 + lncRNA gene predicted gene, 46634
Tssr153624 18 62188865 to 62188901 36 - TSS region transcription start site region 153624
Tssr153625 18 62191458 to 62191469 11 - TSS region transcription start site region 153625
Gm36124 18 62192696 to 62211307 18611 - lncRNA gene predicted gene, 36124
D18Mit151 18 62196005 to 62196112 107 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 151
D18Mit151.1 18 62196090 to 62196200 110 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 151.1
Gm9876 18 62322074 to 62324319 2245 unclassified gene predicted gene 9876
Cpgi10126 18 62323801 to 62324529 728 CpG island CpG island 10126
Tssr151489 18 62323825 to 62323844 19 + TSS region transcription start site region 151489
Htr4 18 62324204 to 62467802 143598 + protein coding gene 5 hydroxytryptamine (serotonin) receptor 4
Tssr151490 18 62324236 to 62324248 12 + TSS region transcription start site region 151490
D18Mit228 18 62333620 to 62333726 106 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 228
Gm36316 18 62371492 to 62406537 35045 - lncRNA gene predicted gene, 36316