Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61788561-62118714

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35919 18 61794853 to 61799862 5009 - pseudogene predicted gene, 35919
Ablim3 18 61799395 to 61911852 112457 - protein coding gene actin binding LIM protein family, member 3
Cpgi10122 18 61799603 to 61800008 405 CpG island CpG island 10122
Tssr153614 18 61826997 to 61827037 40 - TSS region transcription start site region 153614
Tssr5348 18 61827051 to 61827056 5 - TSS region transcription start site region 5348
Tssr5349 18 61884673 to 61884676 3 - TSS region transcription start site region 5349
Cpgi10123 18 61910933 to 61912117 1184 CpG island CpG island 10123
Tssr153615 18 61911533 to 61911610 77 - TSS region transcription start site region 153615
Tssr153616 18 61911747 to 61911758 11 - TSS region transcription start site region 153616
Tssr153617 18 61911783 to 61911854 71 - TSS region transcription start site region 153617
Tssr153618 18 61911880 to 61911888 8 - TSS region transcription start site region 153618
Tssr153619 18 61930228 to 61930250 22 - TSS region transcription start site region 153619
Tssr153620 18 61930251 to 61930274 23 - TSS region transcription start site region 153620
Gm37774 18 61934976 to 61935220 244 - unclassified gene predicted gene, 37774
D18Mit152 18 61936767 to 61936906 139 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 152
Gm35720 18 61937361 to 61940077 2716 + lncRNA gene predicted gene, 35720
Tssr151483 18 61952960 to 61952997 37 + TSS region transcription start site region 151483
Tssr151484 18 61953048 to 61953121 73 + TSS region transcription start site region 151484
Sh3tc2 18 61953075 to 62015715 62640 + protein coding gene SH3 domain and tetratricopeptide repeats 2
Cpgi10124 18 61953561 to 61953714 153 CpG island CpG island 10124
Tssr151485 18 61965608 to 61965610 2 + TSS region transcription start site region 151485
Gm35778 18 62028176 to 62033936 5760 + lncRNA gene predicted gene, 35778
Gm35887 18 62044712 to 62083606 38894 - lncRNA gene predicted gene, 35887
Gm41750 18 62093209 to 62146379 53170 + lncRNA gene predicted gene, 41750